Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2732 and Psest_2733 are separated by 439 nucleotides Psest_2733 and Psest_2735 are separated by 600 nucleotides
Psest_2732: Psest_2732 - Ribonucleotide reductase, beta subunit, at 2,923,465 to 2,924,712
_2732
Psest_2733: Psest_2733 - Uncharacterized protein conserved in bacteria (DUF2188)., at 2,925,152 to 2,925,376
_2733
Psest_2735: Psest_2735 - hypothetical protein, at 2,925,977 to 2,926,651
_2735
Position (kb)
2925
2926 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2924.741 kb on + strand at 2924.742 kb on - strand at 2924.755 kb on - strand at 2924.762 kb on + strand at 2924.762 kb on + strand at 2924.771 kb on + strand at 2924.771 kb on + strand at 2924.771 kb on + strand at 2924.771 kb on + strand at 2924.771 kb on + strand at 2924.772 kb on - strand at 2924.772 kb on - strand at 2924.772 kb on - strand at 2924.772 kb on - strand at 2924.955 kb on - strand at 2924.955 kb on - strand at 2924.993 kb on - strand at 2925.044 kb on + strand at 2925.044 kb on + strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.089 kb on - strand at 2925.111 kb on - strand at 2925.130 kb on + strand at 2925.130 kb on + strand at 2925.130 kb on + strand at 2925.131 kb on - strand at 2925.131 kb on - strand at 2925.131 kb on - strand at 2925.131 kb on - strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.145 kb on - strand at 2925.145 kb on - strand at 2925.145 kb on - strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.149 kb on - strand at 2925.149 kb on - strand at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.214 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.226 kb on + strand, within Psest_2733 at 2925.227 kb on - strand, within Psest_2733 at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.516 kb on + strand at 2925.721 kb on + strand at 2925.907 kb on + strand at 2925.931 kb on + strand at 2925.931 kb on + strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.935 kb on + strand at 2925.935 kb on + strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.954 kb on - strand at 2925.954 kb on - strand at 2926.047 kb on + strand, within Psest_2735 at 2926.182 kb on + strand, within Psest_2735 at 2926.182 kb on + strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.189 kb on - strand, within Psest_2735 at 2926.213 kb on + strand, within Psest_2735 at 2926.214 kb on - strand, within Psest_2735 at 2926.214 kb on - strand, within Psest_2735 at 2926.217 kb on + strand, within Psest_2735 at 2926.217 kb on + strand, within Psest_2735 at 2926.218 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 2,924,741 + +0.9 2,924,742 - -0.9 2,924,755 - -1.8 2,924,762 + -0.8 2,924,762 + +0.1 2,924,771 + -0.5 2,924,771 + +1.4 2,924,771 + -0.8 2,924,771 + +1.5 2,924,771 + +0.6 2,924,772 - -0.9 2,924,772 - +1.6 2,924,772 - +1.0 2,924,772 - +2.1 2,924,955 - -0.1 2,924,955 - +2.5 2,924,993 - +2.9 2,925,044 + -0.4 2,925,044 + +1.6 2,925,045 - +3.5 2,925,045 - +0.1 2,925,045 - +0.7 2,925,045 - +1.5 2,925,045 - -2.3 2,925,089 - +0.8 2,925,111 - +0.6 2,925,130 + +2.5 2,925,130 + +0.9 2,925,130 + +1.8 2,925,131 - +3.3 2,925,131 - +1.1 2,925,131 - +1.5 2,925,131 - +3.8 2,925,144 + +0.2 2,925,144 + -0.2 2,925,144 + -2.3 2,925,144 + +1.5 2,925,144 + +0.9 2,925,144 + -0.3 2,925,144 + +0.5 2,925,145 - -0.4 2,925,145 - +1.6 2,925,145 - +2.0 2,925,148 + -1.2 2,925,148 + +3.8 2,925,148 + +1.2 2,925,148 + -0.2 2,925,148 + -2.4 2,925,148 + +0.7 2,925,149 - +2.5 2,925,149 - -0.3 2,925,191 - Psest_2733 0.17 +1.5 2,925,191 - Psest_2733 0.17 +1.6 2,925,191 - Psest_2733 0.17 -0.9 2,925,191 - Psest_2733 0.17 -0.8 2,925,191 - Psest_2733 0.17 +2.5 2,925,214 + Psest_2733 0.28 -3.4 2,925,220 + Psest_2733 0.30 +1.4 2,925,220 + Psest_2733 0.30 -2.3 2,925,220 + Psest_2733 0.30 +0.1 2,925,220 + Psest_2733 0.30 +2.7 2,925,220 + Psest_2733 0.30 +2.1 2,925,226 + Psest_2733 0.33 +0.6 2,925,227 - Psest_2733 0.33 -0.6 2,925,389 + +2.2 2,925,389 + -1.8 2,925,389 + +0.6 2,925,389 + +3.4 2,925,389 + +1.4 2,925,389 + +1.8 2,925,389 + +0.7 2,925,389 + +2.2 2,925,389 + +3.1 2,925,389 + +1.1 2,925,389 + +1.2 2,925,389 + -0.4 2,925,389 + -0.9 2,925,390 - +1.1 2,925,390 - +1.7 2,925,390 - +1.4 2,925,390 - +0.7 2,925,390 - +0.9 2,925,390 - -0.3 2,925,390 - +0.6 2,925,390 - +1.0 2,925,391 + +0.5 2,925,391 + +0.2 2,925,391 + +0.8 2,925,391 + -0.3 2,925,391 + -0.1 2,925,391 + -0.9 2,925,391 + +1.6 2,925,391 + +1.2 2,925,392 - +2.6 2,925,392 - -0.6 2,925,392 - +0.7 2,925,392 - -0.1 2,925,392 - -1.3 2,925,392 - +1.6 2,925,516 + -0.9 2,925,721 + -0.5 2,925,907 + -1.5 2,925,931 + -0.4 2,925,931 + +0.7 2,925,932 - -1.3 2,925,932 - -0.5 2,925,932 - +0.2 2,925,932 - -2.0 2,925,932 - +0.2 2,925,935 + -0.3 2,925,935 + -2.5 2,925,936 - +2.3 2,925,936 - +2.5 2,925,936 - -0.9 2,925,936 - +1.6 2,925,936 - +0.1 2,925,954 - -1.2 2,925,954 - +0.5 2,926,047 + Psest_2735 0.10 -0.3 2,926,182 + Psest_2735 0.30 +1.3 2,926,182 + Psest_2735 0.30 +1.0 2,926,183 - Psest_2735 0.31 -0.9 2,926,183 - Psest_2735 0.31 -0.4 2,926,183 - Psest_2735 0.31 -0.6 2,926,189 - Psest_2735 0.31 +2.4 2,926,213 + Psest_2735 0.35 +0.5 2,926,214 - Psest_2735 0.35 -2.1 2,926,214 - Psest_2735 0.35 -3.0 2,926,217 + Psest_2735 0.36 +0.8 2,926,217 + Psest_2735 0.36 +0.5 2,926,218 - Psest_2735 0.36 -0.3 2,926,320 - Psest_2735 0.51 -0.6 2,926,320 - Psest_2735 0.51 +0.1 2,926,320 - Psest_2735 0.51 +0.0 2,926,320 - Psest_2735 0.51 -0.6 2,926,363 + Psest_2735 0.57 +2.1 2,926,363 + Psest_2735 0.57 +1.0 2,926,363 + Psest_2735 0.57 +2.1 2,926,363 + Psest_2735 0.57 -2.3
Or see this region's nucleotide sequence