Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2660 and Psest_2661 are separated by 200 nucleotides Psest_2661 and Psest_2662 are separated by 227 nucleotides
Psest_2660: Psest_2660 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,846,641 to 2,847,843
_2660
Psest_2661: Psest_2661 - Isopropylmalate/homocitrate/citramalate synthases, at 2,848,044 to 2,848,979
_2661
Psest_2662: Psest_2662 - hypothetical protein, at 2,849,207 to 2,850,085
_2662
Position (kb)
2848
2849 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.091 kb on - strand, within Psest_2660 at 2847.091 kb on - strand, within Psest_2660 at 2847.178 kb on + strand, within Psest_2660 at 2847.194 kb on + strand, within Psest_2660 at 2847.298 kb on + strand, within Psest_2660 at 2847.299 kb on - strand, within Psest_2660 at 2847.317 kb on + strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.608 kb on - strand, within Psest_2660 at 2847.609 kb on + strand, within Psest_2660 at 2847.640 kb on + strand, within Psest_2660 at 2847.641 kb on - strand, within Psest_2660 at 2847.779 kb on + strand at 2847.923 kb on + strand at 2847.930 kb on + strand at 2847.930 kb on + strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.942 kb on + strand at 2847.942 kb on + strand at 2847.942 kb on + strand at 2847.943 kb on - strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.059 kb on + strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.060 kb on - strand at 2848.266 kb on + strand, within Psest_2661 at 2848.267 kb on - strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.421 kb on - strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.784 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2849.209 kb on - strand at 2849.210 kb on + strand at 2849.211 kb on - strand at 2849.261 kb on + strand at 2849.272 kb on - strand at 2849.315 kb on - strand, within Psest_2662 at 2849.315 kb on - strand, within Psest_2662 at 2849.357 kb on + strand, within Psest_2662 at 2849.357 kb on + strand, within Psest_2662 at 2849.364 kb on - strand, within Psest_2662 at 2849.378 kb on + strand, within Psest_2662 at 2849.585 kb on + strand, within Psest_2662 at 2849.616 kb on - strand, within Psest_2662 at 2849.646 kb on - strand, within Psest_2662 at 2849.655 kb on - strand, within Psest_2662 at 2849.670 kb on - strand, within Psest_2662 at 2849.720 kb on - strand, within Psest_2662 at 2849.740 kb on + strand, within Psest_2662 at 2849.741 kb on - strand, within Psest_2662 at 2849.768 kb on + strand, within Psest_2662 at 2849.816 kb on + strand, within Psest_2662 at 2849.877 kb on + strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 2,847,090 + Psest_2660 0.37 -0.3 2,847,090 + Psest_2660 0.37 -0.6 2,847,090 + Psest_2660 0.37 +3.3 2,847,090 + Psest_2660 0.37 -1.2 2,847,091 - Psest_2660 0.37 +0.6 2,847,091 - Psest_2660 0.37 +1.8 2,847,178 + Psest_2660 0.45 -2.2 2,847,194 + Psest_2660 0.46 +1.3 2,847,298 + Psest_2660 0.55 -0.6 2,847,299 - Psest_2660 0.55 -0.8 2,847,317 + Psest_2660 0.56 +0.3 2,847,389 - Psest_2660 0.62 +0.7 2,847,389 - Psest_2660 0.62 -0.9 2,847,389 - Psest_2660 0.62 +0.3 2,847,389 - Psest_2660 0.62 +2.0 2,847,421 + Psest_2660 0.65 -0.1 2,847,421 + Psest_2660 0.65 +1.4 2,847,421 + Psest_2660 0.65 +0.3 2,847,421 + Psest_2660 0.65 +1.0 2,847,421 + Psest_2660 0.65 -1.9 2,847,421 + Psest_2660 0.65 -0.8 2,847,421 + Psest_2660 0.65 -0.5 2,847,422 - Psest_2660 0.65 -0.0 2,847,422 - Psest_2660 0.65 -2.6 2,847,422 - Psest_2660 0.65 +1.3 2,847,422 - Psest_2660 0.65 +0.4 2,847,422 - Psest_2660 0.65 -1.3 2,847,422 - Psest_2660 0.65 +2.0 2,847,422 - Psest_2660 0.65 -1.3 2,847,422 - Psest_2660 0.65 -1.3 2,847,422 - Psest_2660 0.65 -0.8 2,847,422 - Psest_2660 0.65 +0.2 2,847,422 - Psest_2660 0.65 -1.0 2,847,422 - Psest_2660 0.65 +0.5 2,847,608 - Psest_2660 0.80 +0.2 2,847,609 + Psest_2660 0.80 -0.1 2,847,640 + Psest_2660 0.83 +1.6 2,847,641 - Psest_2660 0.83 -0.9 2,847,779 + -0.6 2,847,923 + +2.0 2,847,930 + +1.2 2,847,930 + -0.6 2,847,931 - -0.3 2,847,931 - -0.8 2,847,931 - -0.0 2,847,931 - +2.6 2,847,931 - -0.6 2,847,931 - +1.4 2,847,942 + +0.4 2,847,942 + -1.8 2,847,942 + +3.3 2,847,943 - +0.5 2,848,059 + +0.6 2,848,059 + -0.4 2,848,059 + -2.0 2,848,059 + -2.3 2,848,059 + -1.6 2,848,059 + -1.9 2,848,059 + -0.6 2,848,059 + +0.4 2,848,059 + -0.0 2,848,059 + +0.7 2,848,059 + +0.7 2,848,060 - -0.5 2,848,060 - +1.0 2,848,060 - +0.9 2,848,060 - -0.1 2,848,060 - +1.6 2,848,060 - -0.7 2,848,060 - -0.3 2,848,060 - -0.6 2,848,060 - -0.8 2,848,060 - -0.3 2,848,060 - +0.5 2,848,060 - +0.4 2,848,060 - -0.8 2,848,060 - +3.8 2,848,060 - -0.8 2,848,266 + Psest_2661 0.24 +1.6 2,848,267 - Psest_2661 0.24 +0.3 2,848,420 + Psest_2661 0.40 -0.8 2,848,420 + Psest_2661 0.40 -3.5 2,848,420 + Psest_2661 0.40 -0.7 2,848,420 + Psest_2661 0.40 -0.8 2,848,420 + Psest_2661 0.40 -1.3 2,848,421 - Psest_2661 0.40 +1.7 2,848,515 + Psest_2661 0.50 -0.9 2,848,515 + Psest_2661 0.50 -0.6 2,848,515 + Psest_2661 0.50 -0.1 2,848,515 + Psest_2661 0.50 -0.3 2,848,515 + Psest_2661 0.50 +0.1 2,848,515 + Psest_2661 0.50 +0.9 2,848,515 + Psest_2661 0.50 -0.7 2,848,515 + Psest_2661 0.50 -0.7 2,848,516 - Psest_2661 0.50 -1.3 2,848,516 - Psest_2661 0.50 -1.3 2,848,516 - Psest_2661 0.50 -0.1 2,848,516 - Psest_2661 0.50 -0.9 2,848,516 - Psest_2661 0.50 -1.2 2,848,516 - Psest_2661 0.50 -1.6 2,848,516 - Psest_2661 0.50 +0.3 2,848,516 - Psest_2661 0.50 -0.0 2,848,516 - Psest_2661 0.50 +2.0 2,848,516 - Psest_2661 0.50 -1.5 2,848,784 + Psest_2661 0.79 -1.3 2,848,808 + Psest_2661 0.82 +1.0 2,848,808 + Psest_2661 0.82 -1.0 2,848,808 + Psest_2661 0.82 +0.3 2,848,808 + Psest_2661 0.82 -0.3 2,848,808 + Psest_2661 0.82 -1.5 2,848,808 + Psest_2661 0.82 -0.4 2,848,808 + Psest_2661 0.82 +0.4 2,848,808 + Psest_2661 0.82 -1.3 2,848,808 + Psest_2661 0.82 -0.2 2,848,808 + Psest_2661 0.82 -0.6 2,848,808 + Psest_2661 0.82 +0.5 2,848,808 + Psest_2661 0.82 +0.4 2,848,808 + Psest_2661 0.82 -2.3 2,848,809 - Psest_2661 0.82 -0.3 2,848,809 - Psest_2661 0.82 +0.4 2,848,809 - Psest_2661 0.82 -0.0 2,848,809 - Psest_2661 0.82 -0.8 2,848,809 - Psest_2661 0.82 +1.6 2,848,809 - Psest_2661 0.82 -0.8 2,848,809 - Psest_2661 0.82 -0.6 2,848,809 - Psest_2661 0.82 +0.8 2,848,809 - Psest_2661 0.82 +3.0 2,848,809 - Psest_2661 0.82 -1.6 2,848,809 - Psest_2661 0.82 -0.0 2,848,809 - Psest_2661 0.82 -0.0 2,848,809 - Psest_2661 0.82 -2.1 2,848,809 - Psest_2661 0.82 -1.5 2,849,209 - -0.3 2,849,210 + -0.6 2,849,211 - +1.8 2,849,261 + -0.0 2,849,272 - -2.1 2,849,315 - Psest_2662 0.12 -3.0 2,849,315 - Psest_2662 0.12 -1.2 2,849,357 + Psest_2662 0.17 -0.1 2,849,357 + Psest_2662 0.17 -0.9 2,849,364 - Psest_2662 0.18 +1.0 2,849,378 + Psest_2662 0.19 +0.1 2,849,585 + Psest_2662 0.43 +1.0 2,849,616 - Psest_2662 0.47 -0.8 2,849,646 - Psest_2662 0.50 -0.7 2,849,655 - Psest_2662 0.51 -2.4 2,849,670 - Psest_2662 0.53 -1.0 2,849,720 - Psest_2662 0.58 -1.1 2,849,740 + Psest_2662 0.61 -0.8 2,849,741 - Psest_2662 0.61 -2.4 2,849,768 + Psest_2662 0.64 +1.3 2,849,816 + Psest_2662 0.69 +2.0 2,849,877 + Psest_2662 0.76 -1.6 2,849,878 - Psest_2662 0.76 -0.5 2,849,878 - Psest_2662 0.76 +0.4 2,849,878 - Psest_2662 0.76 -2.0
Or see this region's nucleotide sequence