Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2580 and Psest_2581 are separated by 98 nucleotides Psest_2581 and Psest_2582 overlap by 17 nucleotides Psest_2582 and Psest_2583 overlap by 4 nucleotides
Psest_2580: Psest_2580 - Uncharacterized membrane protein, required for colicin V production, at 2,760,778 to 2,761,323
_2580
Psest_2581: Psest_2581 - Uncharacterized protein conserved in bacteria, at 2,761,422 to 2,762,054
_2581
Psest_2582: Psest_2582 - folylpolyglutamate synthase/dihydrofolate synthase, at 2,762,038 to 2,763,342
_2582
Psest_2583: Psest_2583 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit, at 2,763,339 to 2,764,232
_2583
Position (kb)
2762
2763
2764 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2761.122 kb on - strand, within Psest_2580 at 2761.122 kb on - strand, within Psest_2580 at 2761.122 kb on - strand, within Psest_2580 at 2761.544 kb on + strand, within Psest_2581 at 2761.545 kb on - strand, within Psest_2581 at 2761.564 kb on + strand, within Psest_2581 at 2761.565 kb on - strand, within Psest_2581 at 2761.565 kb on - strand, within Psest_2581 at 2761.573 kb on + strand, within Psest_2581 at 2764.305 kb on - strand at 2764.305 kb on - strand at 2764.305 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 2,761,122 - Psest_2580 0.63 -1.1 2,761,122 - Psest_2580 0.63 -0.5 2,761,122 - Psest_2580 0.63 +0.9 2,761,544 + Psest_2581 0.19 +0.1 2,761,545 - Psest_2581 0.19 +5.2 2,761,564 + Psest_2581 0.22 +0.2 2,761,565 - Psest_2581 0.23 -1.9 2,761,565 - Psest_2581 0.23 +1.2 2,761,573 + Psest_2581 0.24 -1.9 2,764,305 - +2.1 2,764,305 - +0.5 2,764,305 - +1.1
Or see this region's nucleotide sequence