Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2343 and Psest_2344 are separated by 106 nucleotides Psest_2344 and Psest_2346 are separated by 346 nucleotides
Psest_2343: Psest_2343 - Mg-dependent DNase, at 2,497,342 to 2,498,148
_2343
Psest_2344: Psest_2344 - Methyl-accepting chemotaxis protein, at 2,498,255 to 2,499,724
_2344
Psest_2346: Psest_2346 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 2,500,071 to 2,500,961
_2346
Position (kb)
2498
2499
2500 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2497.843 kb on + strand, within Psest_2343 at 2497.844 kb on - strand, within Psest_2343 at 2497.844 kb on - strand, within Psest_2343 at 2497.850 kb on - strand, within Psest_2343 at 2497.976 kb on - strand, within Psest_2343 at 2498.032 kb on + strand, within Psest_2343 at 2498.033 kb on - strand, within Psest_2343 at 2498.237 kb on + strand at 2498.239 kb on + strand at 2498.239 kb on + strand at 2498.239 kb on + strand at 2498.239 kb on + strand at 2498.240 kb on - strand at 2498.240 kb on - strand at 2498.240 kb on - strand at 2498.240 kb on - strand at 2498.240 kb on - strand at 2498.288 kb on + strand at 2498.345 kb on + strand at 2498.739 kb on + strand, within Psest_2344 at 2498.752 kb on + strand, within Psest_2344 at 2498.753 kb on - strand, within Psest_2344 at 2498.753 kb on - strand, within Psest_2344 at 2498.968 kb on + strand, within Psest_2344 at 2499.236 kb on - strand, within Psest_2344 at 2499.629 kb on - strand at 2499.923 kb on + strand at 2499.931 kb on + strand at 2500.198 kb on + strand, within Psest_2346 at 2500.227 kb on + strand, within Psest_2346 at 2500.350 kb on + strand, within Psest_2346 at 2500.426 kb on + strand, within Psest_2346 at 2500.426 kb on + strand, within Psest_2346 at 2500.427 kb on - strand, within Psest_2346 at 2500.427 kb on - strand, within Psest_2346
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 2,497,843 + Psest_2343 0.62 +0.0 2,497,844 - Psest_2343 0.62 -2.7 2,497,844 - Psest_2343 0.62 -0.7 2,497,850 - Psest_2343 0.63 +1.0 2,497,976 - Psest_2343 0.79 -0.1 2,498,032 + Psest_2343 0.86 +0.5 2,498,033 - Psest_2343 0.86 +0.2 2,498,237 + -1.8 2,498,239 + -0.1 2,498,239 + +0.0 2,498,239 + +0.8 2,498,239 + +0.0 2,498,240 - +1.1 2,498,240 - -1.4 2,498,240 - -1.7 2,498,240 - +0.3 2,498,240 - +3.0 2,498,288 + +1.0 2,498,345 + +1.6 2,498,739 + Psest_2344 0.33 +0.0 2,498,752 + Psest_2344 0.34 -0.5 2,498,753 - Psest_2344 0.34 -0.8 2,498,753 - Psest_2344 0.34 -0.8 2,498,968 + Psest_2344 0.49 -1.0 2,499,236 - Psest_2344 0.67 -1.7 2,499,629 - -1.5 2,499,923 + +0.0 2,499,931 + -0.2 2,500,198 + Psest_2346 0.14 +1.0 2,500,227 + Psest_2346 0.18 -0.9 2,500,350 + Psest_2346 0.31 +3.0 2,500,426 + Psest_2346 0.40 +0.8 2,500,426 + Psest_2346 0.40 +2.5 2,500,427 - Psest_2346 0.40 +3.6 2,500,427 - Psest_2346 0.40 +0.1
Or see this region's nucleotide sequence