Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2095 and Psest_2096 are separated by 330 nucleotides Psest_2096 and Psest_2097 are separated by 43 nucleotides
Psest_2095: Psest_2095 - Arabinose efflux permease, at 2,222,849 to 2,223,997
_2095
Psest_2096: Psest_2096 - Domain of unknown function (DUF1883)., at 2,224,328 to 2,224,627
_2096
Psest_2097: Psest_2097 - EamA-like transporter family., at 2,224,671 to 2,225,648
_2097
Position (kb)
2224
2225 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2223.342 kb on + strand, within Psest_2095 at 2223.343 kb on - strand, within Psest_2095 at 2223.343 kb on - strand, within Psest_2095 at 2223.365 kb on + strand, within Psest_2095 at 2223.366 kb on - strand, within Psest_2095 at 2223.366 kb on - strand, within Psest_2095 at 2223.531 kb on - strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.561 kb on + strand, within Psest_2095 at 2223.562 kb on - strand, within Psest_2095 at 2223.562 kb on - strand, within Psest_2095 at 2223.562 kb on - strand, within Psest_2095 at 2223.562 kb on - strand, within Psest_2095 at 2223.562 kb on - strand, within Psest_2095 at 2223.745 kb on + strand, within Psest_2095 at 2223.882 kb on + strand, within Psest_2095 at 2223.882 kb on + strand, within Psest_2095 at 2223.882 kb on + strand, within Psest_2095 at 2223.882 kb on + strand, within Psest_2095 at 2223.882 kb on + strand, within Psest_2095 at 2223.883 kb on - strand at 2223.883 kb on - strand at 2224.185 kb on + strand at 2224.284 kb on + strand at 2224.338 kb on + strand at 2224.338 kb on + strand at 2224.338 kb on + strand at 2224.338 kb on + strand at 2224.339 kb on - strand at 2224.460 kb on + strand, within Psest_2096 at 2224.461 kb on - strand, within Psest_2096 at 2224.461 kb on - strand, within Psest_2096 at 2224.461 kb on - strand, within Psest_2096 at 2224.626 kb on - strand at 2224.956 kb on + strand, within Psest_2097 at 2224.972 kb on + strand, within Psest_2097 at 2225.250 kb on + strand, within Psest_2097 at 2225.285 kb on + strand, within Psest_2097 at 2225.364 kb on - strand, within Psest_2097 at 2225.424 kb on + strand, within Psest_2097 at 2225.424 kb on + strand, within Psest_2097 at 2225.425 kb on - strand, within Psest_2097 at 2225.509 kb on - strand, within Psest_2097 at 2225.515 kb on - strand, within Psest_2097 at 2225.515 kb on - strand, within Psest_2097 at 2225.515 kb on - strand, within Psest_2097
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 2,223,342 + Psest_2095 0.43 -1.4 2,223,343 - Psest_2095 0.43 +1.9 2,223,343 - Psest_2095 0.43 -2.2 2,223,365 + Psest_2095 0.45 +1.5 2,223,366 - Psest_2095 0.45 +2.0 2,223,366 - Psest_2095 0.45 +0.9 2,223,531 - Psest_2095 0.59 -1.2 2,223,561 + Psest_2095 0.62 +1.5 2,223,561 + Psest_2095 0.62 -0.0 2,223,561 + Psest_2095 0.62 -0.6 2,223,561 + Psest_2095 0.62 +1.0 2,223,561 + Psest_2095 0.62 +0.8 2,223,561 + Psest_2095 0.62 -0.1 2,223,561 + Psest_2095 0.62 -0.3 2,223,561 + Psest_2095 0.62 +0.2 2,223,562 - Psest_2095 0.62 +1.4 2,223,562 - Psest_2095 0.62 -0.9 2,223,562 - Psest_2095 0.62 +0.9 2,223,562 - Psest_2095 0.62 -0.5 2,223,562 - Psest_2095 0.62 +1.3 2,223,745 + Psest_2095 0.78 -0.0 2,223,882 + Psest_2095 0.90 -1.7 2,223,882 + Psest_2095 0.90 +0.1 2,223,882 + Psest_2095 0.90 -0.8 2,223,882 + Psest_2095 0.90 -2.1 2,223,882 + Psest_2095 0.90 +1.8 2,223,883 - -0.3 2,223,883 - +0.9 2,224,185 + +0.3 2,224,284 + -2.8 2,224,338 + -1.0 2,224,338 + +0.3 2,224,338 + +0.7 2,224,338 + -0.4 2,224,339 - -1.4 2,224,460 + Psest_2096 0.44 -0.3 2,224,461 - Psest_2096 0.44 +0.0 2,224,461 - Psest_2096 0.44 -1.0 2,224,461 - Psest_2096 0.44 -0.3 2,224,626 - -1.9 2,224,956 + Psest_2097 0.29 -0.9 2,224,972 + Psest_2097 0.31 +0.3 2,225,250 + Psest_2097 0.59 -1.7 2,225,285 + Psest_2097 0.63 -3.3 2,225,364 - Psest_2097 0.71 +0.3 2,225,424 + Psest_2097 0.77 -0.8 2,225,424 + Psest_2097 0.77 -0.4 2,225,425 - Psest_2097 0.77 -0.6 2,225,509 - Psest_2097 0.86 +0.3 2,225,515 - Psest_2097 0.86 -2.1 2,225,515 - Psest_2097 0.86 +3.0 2,225,515 - Psest_2097 0.86 +1.0
Or see this region's nucleotide sequence