Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0183 and Psest_0184 are separated by 183 nucleotides Psest_0184 and Psest_0185 are separated by 265 nucleotides
Psest_0183: Psest_0183 - glycine dehydrogenase (decarboxylating), at 176,947 to 179,823
_0183
Psest_0184: Psest_0184 - ribosome biogenesis GTP-binding protein YsxC/EngB, at 180,007 to 180,660
_0184
Psest_0185: Psest_0185 - Cytochrome c553, at 180,926 to 181,558
_0185
Position (kb) 180
181 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.248 kb on + strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.249 kb on - strand, within Psest_0183 at 179.250 kb on + strand, within Psest_0183 at 179.311 kb on + strand, within Psest_0183 at 179.312 kb on - strand, within Psest_0183 at 179.312 kb on - strand, within Psest_0183 at 179.312 kb on - strand, within Psest_0183 at 179.312 kb on - strand, within Psest_0183 at 179.351 kb on - strand, within Psest_0183 at 179.458 kb on + strand, within Psest_0183 at 179.633 kb on + strand at 179.633 kb on + strand at 179.633 kb on + strand at 179.634 kb on - strand at 179.634 kb on - strand at 179.646 kb on + strand at 179.735 kb on - strand at 179.735 kb on - strand at 179.735 kb on - strand at 179.812 kb on + strand at 179.851 kb on + strand at 179.852 kb on - strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.959 kb on + strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 179.960 kb on - strand at 180.008 kb on + strand at 180.009 kb on - strand at 180.009 kb on - strand at 180.009 kb on - strand at 180.722 kb on - strand at 180.722 kb on - strand at 180.722 kb on - strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.723 kb on + strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.724 kb on - strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.725 kb on + strand at 180.726 kb on - strand at 180.726 kb on - strand at 180.726 kb on - strand at 180.741 kb on - strand at 180.773 kb on + strand at 180.843 kb on + strand at 180.844 kb on - strand at 180.911 kb on + strand at 180.911 kb on + strand at 180.920 kb on + strand at 180.921 kb on - strand at 180.936 kb on + strand at 181.418 kb on + strand, within Psest_0185 at 181.419 kb on - strand, within Psest_0185 at 181.538 kb on + strand at 181.569 kb on - strand at 181.598 kb on + strand at 181.599 kb on - strand at 181.599 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 179,248 + Psest_0183 0.80 -2.3 179,248 + Psest_0183 0.80 +0.8 179,248 + Psest_0183 0.80 -1.0 179,248 + Psest_0183 0.80 -1.4 179,248 + Psest_0183 0.80 -2.0 179,248 + Psest_0183 0.80 -0.2 179,248 + Psest_0183 0.80 +0.2 179,248 + Psest_0183 0.80 -1.9 179,248 + Psest_0183 0.80 -1.8 179,248 + Psest_0183 0.80 +1.5 179,248 + Psest_0183 0.80 +0.2 179,248 + Psest_0183 0.80 -2.6 179,248 + Psest_0183 0.80 +1.0 179,248 + Psest_0183 0.80 -1.8 179,248 + Psest_0183 0.80 -0.5 179,249 - Psest_0183 0.80 +0.8 179,249 - Psest_0183 0.80 -0.3 179,249 - Psest_0183 0.80 -0.3 179,249 - Psest_0183 0.80 +0.2 179,249 - Psest_0183 0.80 -0.2 179,249 - Psest_0183 0.80 +1.6 179,249 - Psest_0183 0.80 +0.2 179,249 - Psest_0183 0.80 +0.2 179,249 - Psest_0183 0.80 -2.9 179,249 - Psest_0183 0.80 -1.0 179,249 - Psest_0183 0.80 -0.8 179,249 - Psest_0183 0.80 +0.2 179,249 - Psest_0183 0.80 +0.4 179,249 - Psest_0183 0.80 -1.3 179,249 - Psest_0183 0.80 -0.6 179,250 + Psest_0183 0.80 +0.1 179,311 + Psest_0183 0.82 -1.3 179,312 - Psest_0183 0.82 +1.1 179,312 - Psest_0183 0.82 +1.2 179,312 - Psest_0183 0.82 -0.2 179,312 - Psest_0183 0.82 -1.0 179,351 - Psest_0183 0.84 -0.5 179,458 + Psest_0183 0.87 -0.9 179,633 + +0.1 179,633 + +0.8 179,633 + +1.4 179,634 - -0.1 179,634 - -1.2 179,646 + +1.2 179,735 - +2.4 179,735 - -0.8 179,735 - -0.1 179,812 + +1.2 179,851 + -0.5 179,852 - -1.2 179,959 + +1.8 179,959 + -0.1 179,959 + -0.5 179,959 + -1.0 179,959 + -1.2 179,959 + +0.4 179,959 + -0.2 179,959 + -0.2 179,959 + +0.4 179,959 + -2.6 179,959 + -0.5 179,959 + -0.5 179,959 + +0.8 179,959 + +0.7 179,959 + +0.3 179,959 + -1.1 179,959 + -2.5 179,960 - +0.2 179,960 - -0.3 179,960 - +1.2 179,960 - +1.0 179,960 - +1.3 179,960 - +2.0 179,960 - -0.7 179,960 - +2.4 179,960 - -0.3 179,960 - +0.4 179,960 - -0.2 180,008 + -0.2 180,009 - +0.9 180,009 - +0.7 180,009 - -0.5 180,722 - +0.8 180,722 - +0.8 180,722 - -1.2 180,723 + +0.3 180,723 + -1.2 180,723 + -1.6 180,723 + -0.2 180,723 + +0.4 180,723 + -0.4 180,723 + -1.9 180,723 + -0.2 180,723 + -0.1 180,723 + -1.0 180,723 + -3.2 180,723 + +0.6 180,723 + +0.8 180,723 + +4.2 180,724 - -1.3 180,724 - -0.2 180,724 - -1.2 180,724 - +0.6 180,724 - +0.1 180,724 - +0.8 180,724 - -0.7 180,724 - +0.8 180,724 - -1.2 180,724 - -0.3 180,724 - -0.7 180,724 - -0.3 180,724 - -2.2 180,725 + +1.4 180,725 + -1.2 180,725 + -1.0 180,725 + +1.8 180,725 + +0.6 180,725 + -0.7 180,725 + -0.2 180,725 + -1.7 180,725 + +1.4 180,725 + -0.7 180,725 + -2.0 180,725 + +0.3 180,725 + +2.6 180,726 - +0.0 180,726 - +0.8 180,726 - -0.5 180,741 - +0.8 180,773 + +2.0 180,843 + -0.2 180,844 - -0.2 180,911 + -1.2 180,911 + +0.5 180,920 + -1.6 180,921 - +0.3 180,936 + -0.5 181,418 + Psest_0185 0.78 +0.3 181,419 - Psest_0185 0.78 -0.2 181,538 + +0.3 181,569 - +0.3 181,598 + +0.3 181,599 - -0.5 181,599 - -2.3
Or see this region's nucleotide sequence