Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1634 and Psest_1635 are separated by 68 nucleotides Psest_1635 and Psest_1636 are separated by 93 nucleotides Psest_1636 and Psest_1637 are separated by 140 nucleotides
Psest_1634: Psest_1634 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain, at 1,734,201 to 1,736,183
_1634
Psest_1635: Psest_1635 - Signal transduction histidine kinase, at 1,736,252 to 1,739,005
_1635
Psest_1636: Psest_1636 - putative transporter, required for glycine utilization (from data) , at 1,739,099 to 1,739,725
_1636
Psest_1637: Psest_1637 - transcriptional regulator, ArgP family, at 1,739,866 to 1,740,759
_1637
Position (kb)
1736
1737
1738
1739
1740 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1735.255 kb on + strand, within Psest_1634 at 1735.255 kb on + strand, within Psest_1634 at 1735.255 kb on + strand, within Psest_1634 at 1735.256 kb on - strand, within Psest_1634 at 1735.256 kb on - strand, within Psest_1634 at 1735.713 kb on + strand, within Psest_1634 at 1735.713 kb on + strand, within Psest_1634 at 1735.714 kb on - strand, within Psest_1634 at 1735.714 kb on - strand, within Psest_1634 at 1735.714 kb on - strand, within Psest_1634 at 1735.714 kb on - strand, within Psest_1634 at 1735.792 kb on + strand, within Psest_1634 at 1735.792 kb on + strand, within Psest_1634 at 1735.793 kb on - strand, within Psest_1634 at 1735.793 kb on - strand, within Psest_1634 at 1735.793 kb on - strand, within Psest_1634 at 1735.793 kb on - strand, within Psest_1634 at 1735.793 kb on - strand, within Psest_1634 at 1736.089 kb on + strand at 1736.089 kb on + strand at 1736.089 kb on + strand at 1736.090 kb on - strand at 1736.090 kb on - strand at 1736.253 kb on + strand at 1736.253 kb on + strand at 1736.270 kb on + strand at 1736.654 kb on + strand, within Psest_1635 at 1736.654 kb on + strand, within Psest_1635 at 1736.654 kb on + strand, within Psest_1635 at 1736.697 kb on + strand, within Psest_1635 at 1736.697 kb on + strand, within Psest_1635 at 1736.698 kb on - strand, within Psest_1635 at 1736.698 kb on - strand, within Psest_1635 at 1736.698 kb on - strand, within Psest_1635 at 1736.698 kb on - strand, within Psest_1635 at 1736.698 kb on - strand, within Psest_1635 at 1737.040 kb on - strand, within Psest_1635 at 1737.086 kb on - strand, within Psest_1635 at 1737.086 kb on - strand, within Psest_1635 at 1737.086 kb on - strand, within Psest_1635 at 1737.086 kb on - strand, within Psest_1635 at 1737.118 kb on + strand, within Psest_1635 at 1737.118 kb on + strand, within Psest_1635 at 1737.119 kb on - strand, within Psest_1635 at 1737.119 kb on - strand, within Psest_1635 at 1737.119 kb on - strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.120 kb on + strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.121 kb on - strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.343 kb on + strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1737.344 kb on - strand, within Psest_1635 at 1738.044 kb on + strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.045 kb on - strand, within Psest_1635 at 1738.117 kb on + strand, within Psest_1635 at 1738.117 kb on + strand, within Psest_1635 at 1738.728 kb on - strand, within Psest_1635 at 1738.812 kb on + strand at 1738.847 kb on + strand at 1738.920 kb on + strand at 1738.920 kb on + strand at 1739.216 kb on - strand, within Psest_1636 at 1739.244 kb on + strand, within Psest_1636 at 1739.245 kb on - strand, within Psest_1636 at 1739.315 kb on + strand, within Psest_1636 at 1739.315 kb on + strand, within Psest_1636 at 1739.533 kb on - strand, within Psest_1636 at 1739.576 kb on + strand, within Psest_1636 at 1739.577 kb on - strand, within Psest_1636 at 1739.703 kb on + strand at 1739.703 kb on + strand at 1739.703 kb on + strand at 1739.703 kb on + strand at 1739.703 kb on + strand at 1739.703 kb on + strand at 1739.704 kb on - strand at 1739.704 kb on - strand at 1739.704 kb on - strand at 1739.710 kb on + strand at 1739.711 kb on - strand at 1739.711 kb on - strand at 1739.825 kb on - strand at 1739.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 1,735,255 + Psest_1634 0.53 -1.0 1,735,255 + Psest_1634 0.53 -0.6 1,735,255 + Psest_1634 0.53 +0.3 1,735,256 - Psest_1634 0.53 +2.1 1,735,256 - Psest_1634 0.53 -0.0 1,735,713 + Psest_1634 0.76 -0.3 1,735,713 + Psest_1634 0.76 -1.6 1,735,714 - Psest_1634 0.76 +2.1 1,735,714 - Psest_1634 0.76 +0.5 1,735,714 - Psest_1634 0.76 +2.1 1,735,714 - Psest_1634 0.76 -2.2 1,735,792 + Psest_1634 0.80 -0.4 1,735,792 + Psest_1634 0.80 +0.1 1,735,793 - Psest_1634 0.80 +0.8 1,735,793 - Psest_1634 0.80 +2.9 1,735,793 - Psest_1634 0.80 -0.2 1,735,793 - Psest_1634 0.80 +0.3 1,735,793 - Psest_1634 0.80 +0.3 1,736,089 + -1.4 1,736,089 + +1.5 1,736,089 + -0.9 1,736,090 - -0.0 1,736,090 - -1.1 1,736,253 + +0.5 1,736,253 + +0.9 1,736,270 + -0.9 1,736,654 + Psest_1635 0.15 +4.0 1,736,654 + Psest_1635 0.15 +4.3 1,736,654 + Psest_1635 0.15 +4.4 1,736,697 + Psest_1635 0.16 +3.3 1,736,697 + Psest_1635 0.16 +4.2 1,736,698 - Psest_1635 0.16 +4.9 1,736,698 - Psest_1635 0.16 +4.4 1,736,698 - Psest_1635 0.16 +4.0 1,736,698 - Psest_1635 0.16 +5.1 1,736,698 - Psest_1635 0.16 +4.5 1,737,040 - Psest_1635 0.29 +4.2 1,737,086 - Psest_1635 0.30 +4.3 1,737,086 - Psest_1635 0.30 +4.9 1,737,086 - Psest_1635 0.30 +4.6 1,737,086 - Psest_1635 0.30 +4.1 1,737,118 + Psest_1635 0.31 +4.2 1,737,118 + Psest_1635 0.31 +4.5 1,737,119 - Psest_1635 0.31 +4.6 1,737,119 - Psest_1635 0.31 +2.8 1,737,119 - Psest_1635 0.31 +4.7 1,737,120 + Psest_1635 0.32 +4.8 1,737,120 + Psest_1635 0.32 +4.1 1,737,120 + Psest_1635 0.32 +3.6 1,737,120 + Psest_1635 0.32 +5.4 1,737,120 + Psest_1635 0.32 +4.6 1,737,120 + Psest_1635 0.32 +5.1 1,737,120 + Psest_1635 0.32 +4.4 1,737,120 + Psest_1635 0.32 +4.5 1,737,120 + Psest_1635 0.32 +4.1 1,737,120 + Psest_1635 0.32 +4.4 1,737,121 - Psest_1635 0.32 +4.2 1,737,121 - Psest_1635 0.32 +4.3 1,737,121 - Psest_1635 0.32 +4.1 1,737,121 - Psest_1635 0.32 +4.7 1,737,121 - Psest_1635 0.32 +4.4 1,737,121 - Psest_1635 0.32 +4.3 1,737,121 - Psest_1635 0.32 +4.7 1,737,121 - Psest_1635 0.32 +4.5 1,737,121 - Psest_1635 0.32 +3.0 1,737,121 - Psest_1635 0.32 +4.2 1,737,121 - Psest_1635 0.32 +2.9 1,737,343 + Psest_1635 0.40 +4.6 1,737,343 + Psest_1635 0.40 +3.5 1,737,343 + Psest_1635 0.40 +4.3 1,737,343 + Psest_1635 0.40 +4.4 1,737,343 + Psest_1635 0.40 +4.4 1,737,343 + Psest_1635 0.40 +4.0 1,737,343 + Psest_1635 0.40 +4.3 1,737,343 + Psest_1635 0.40 +4.0 1,737,343 + Psest_1635 0.40 +4.6 1,737,343 + Psest_1635 0.40 +3.7 1,737,343 + Psest_1635 0.40 +4.2 1,737,344 - Psest_1635 0.40 +4.6 1,737,344 - Psest_1635 0.40 +4.5 1,737,344 - Psest_1635 0.40 +4.8 1,737,344 - Psest_1635 0.40 +4.2 1,737,344 - Psest_1635 0.40 +4.2 1,737,344 - Psest_1635 0.40 +4.3 1,737,344 - Psest_1635 0.40 +3.9 1,737,344 - Psest_1635 0.40 +4.6 1,737,344 - Psest_1635 0.40 +3.6 1,737,344 - Psest_1635 0.40 +3.9 1,738,044 + Psest_1635 0.65 +4.4 1,738,045 - Psest_1635 0.65 +5.0 1,738,045 - Psest_1635 0.65 +1.5 1,738,045 - Psest_1635 0.65 +4.6 1,738,045 - Psest_1635 0.65 +3.7 1,738,045 - Psest_1635 0.65 +3.7 1,738,045 - Psest_1635 0.65 +3.9 1,738,045 - Psest_1635 0.65 +4.4 1,738,117 + Psest_1635 0.68 +4.2 1,738,117 + Psest_1635 0.68 +4.5 1,738,728 - Psest_1635 0.90 +4.2 1,738,812 + +4.4 1,738,847 + +4.1 1,738,920 + +4.2 1,738,920 + +4.4 1,739,216 - Psest_1636 0.19 +0.9 1,739,244 + Psest_1636 0.23 -0.5 1,739,245 - Psest_1636 0.23 -2.5 1,739,315 + Psest_1636 0.34 -0.9 1,739,315 + Psest_1636 0.34 -1.5 1,739,533 - Psest_1636 0.69 +0.3 1,739,576 + Psest_1636 0.76 -1.1 1,739,577 - Psest_1636 0.76 +0.1 1,739,703 + -1.4 1,739,703 + -2.1 1,739,703 + +0.5 1,739,703 + +0.4 1,739,703 + -3.0 1,739,703 + -0.2 1,739,704 - +0.8 1,739,704 - -1.1 1,739,704 - -0.7 1,739,710 + -0.2 1,739,711 - -2.7 1,739,711 - -2.1 1,739,825 - -1.2 1,739,852 - -0.5
Or see this region's nucleotide sequence