Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1329 and Psest_1330 overlap by 4 nucleotides Psest_1330 and Psest_1331 are separated by 241 nucleotides Psest_1331 and Psest_1332 are separated by 69 nucleotides
Psest_1329: Psest_1329 - Alkylated DNA repair protein, at 1,431,998 to 1,432,615
_1329
Psest_1330: Psest_1330 - hypothetical protein, at 1,432,612 to 1,432,773
_1330
Psest_1331: Psest_1331 - hypothetical protein, at 1,433,015 to 1,433,125
_1331
Psest_1332: Psest_1332 - alpha-1,6-glucosidases, pullulanase-type, at 1,433,195 to 1,436,314
_1332
Position (kb)
1433
1434 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1432.151 kb on + strand, within Psest_1329 at 1432.151 kb on + strand, within Psest_1329 at 1432.151 kb on + strand, within Psest_1329 at 1432.151 kb on + strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.152 kb on - strand, within Psest_1329 at 1432.217 kb on + strand, within Psest_1329 at 1432.477 kb on - strand, within Psest_1329 at 1432.477 kb on - strand, within Psest_1329 at 1432.477 kb on - strand, within Psest_1329 at 1432.799 kb on + strand at 1432.800 kb on - strand at 1432.800 kb on - strand at 1432.823 kb on + strand at 1432.824 kb on - strand at 1432.824 kb on - strand at 1432.867 kb on + strand at 1432.867 kb on + strand at 1432.867 kb on + strand at 1432.867 kb on + strand at 1432.870 kb on - strand at 1433.007 kb on + strand at 1433.027 kb on - strand, within Psest_1331 at 1433.159 kb on - strand at 1433.695 kb on - strand, within Psest_1332 at 1433.733 kb on + strand, within Psest_1332 at 1433.733 kb on + strand, within Psest_1332 at 1433.733 kb on + strand, within Psest_1332 at 1433.877 kb on + strand, within Psest_1332 at 1433.878 kb on - strand, within Psest_1332 at 1433.922 kb on + strand, within Psest_1332 at 1433.922 kb on + strand, within Psest_1332 at 1433.923 kb on - strand, within Psest_1332 at 1433.923 kb on - strand, within Psest_1332 at 1433.923 kb on - strand, within Psest_1332 at 1433.950 kb on + strand, within Psest_1332 at 1433.950 kb on + strand, within Psest_1332 at 1433.951 kb on - strand, within Psest_1332 at 1433.951 kb on - strand, within Psest_1332 at 1433.951 kb on - strand, within Psest_1332 at 1433.974 kb on - strand, within Psest_1332
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 1,432,151 + Psest_1329 0.25 +1.4 1,432,151 + Psest_1329 0.25 +0.3 1,432,151 + Psest_1329 0.25 -0.9 1,432,151 + Psest_1329 0.25 -1.4 1,432,152 - Psest_1329 0.25 -1.7 1,432,152 - Psest_1329 0.25 +1.7 1,432,152 - Psest_1329 0.25 +0.9 1,432,152 - Psest_1329 0.25 -1.0 1,432,152 - Psest_1329 0.25 +1.9 1,432,152 - Psest_1329 0.25 -2.2 1,432,152 - Psest_1329 0.25 -1.6 1,432,152 - Psest_1329 0.25 +0.9 1,432,152 - Psest_1329 0.25 +1.5 1,432,217 + Psest_1329 0.35 +0.6 1,432,477 - Psest_1329 0.78 -1.3 1,432,477 - Psest_1329 0.78 -0.9 1,432,477 - Psest_1329 0.78 +0.1 1,432,799 + -1.3 1,432,800 - -0.4 1,432,800 - +0.0 1,432,823 + -0.4 1,432,824 - -2.3 1,432,824 - +0.1 1,432,867 + -0.7 1,432,867 + -2.4 1,432,867 + -1.9 1,432,867 + -1.2 1,432,870 - +0.4 1,433,007 + +0.8 1,433,027 - Psest_1331 0.11 +2.7 1,433,159 - +0.9 1,433,695 - Psest_1332 0.16 +2.1 1,433,733 + Psest_1332 0.17 +0.6 1,433,733 + Psest_1332 0.17 -1.0 1,433,733 + Psest_1332 0.17 -1.7 1,433,877 + Psest_1332 0.22 +0.1 1,433,878 - Psest_1332 0.22 +0.6 1,433,922 + Psest_1332 0.23 +0.0 1,433,922 + Psest_1332 0.23 +1.8 1,433,923 - Psest_1332 0.23 -1.7 1,433,923 - Psest_1332 0.23 -0.4 1,433,923 - Psest_1332 0.23 +1.6 1,433,950 + Psest_1332 0.24 +1.8 1,433,950 + Psest_1332 0.24 +1.6 1,433,951 - Psest_1332 0.24 -0.7 1,433,951 - Psest_1332 0.24 +1.5 1,433,951 - Psest_1332 0.24 -0.0 1,433,974 - Psest_1332 0.25 -1.4
Or see this region's nucleotide sequence