Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1219 and Psest_1220 are separated by 3 nucleotides Psest_1220 and Psest_1221 overlap by 4 nucleotides Psest_1221 and Psest_1222 are separated by 7 nucleotides
Psest_1219: Psest_1219 - Glutathione S-transferase, at 1,326,680 to 1,327,618
_1219
Psest_1220: Psest_1220 - hypothetical protein, at 1,327,622 to 1,328,464
_1220
Psest_1221: Psest_1221 - Uncharacterized conserved protein, at 1,328,461 to 1,329,279
_1221
Psest_1222: Psest_1222 - Nucleoid-associated protein, at 1,329,287 to 1,330,294
_1222
Position (kb)
1328
1329
1330 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1327.515 kb on + strand, within Psest_1219 at 1327.516 kb on - strand, within Psest_1219 at 1327.785 kb on - strand, within Psest_1220 at 1327.893 kb on + strand, within Psest_1220 at 1327.894 kb on - strand, within Psest_1220 at 1327.894 kb on - strand, within Psest_1220 at 1327.894 kb on - strand, within Psest_1220 at 1327.894 kb on - strand, within Psest_1220 at 1327.984 kb on - strand, within Psest_1220 at 1327.998 kb on + strand, within Psest_1220 at 1328.088 kb on + strand, within Psest_1220 at 1328.088 kb on + strand, within Psest_1220 at 1328.088 kb on + strand, within Psest_1220 at 1328.088 kb on + strand, within Psest_1220 at 1328.088 kb on + strand, within Psest_1220 at 1328.089 kb on - strand, within Psest_1220 at 1328.089 kb on - strand, within Psest_1220 at 1328.089 kb on - strand, within Psest_1220 at 1328.089 kb on - strand, within Psest_1220 at 1328.089 kb on - strand, within Psest_1220 at 1328.089 kb on - strand, within Psest_1220 at 1328.202 kb on + strand, within Psest_1220 at 1328.202 kb on + strand, within Psest_1220 at 1328.202 kb on + strand, within Psest_1220 at 1328.203 kb on - strand, within Psest_1220 at 1328.203 kb on - strand, within Psest_1220 at 1328.435 kb on + strand at 1328.436 kb on - strand at 1328.594 kb on - strand, within Psest_1221 at 1328.600 kb on + strand, within Psest_1221 at 1328.600 kb on + strand, within Psest_1221 at 1328.600 kb on + strand, within Psest_1221 at 1328.601 kb on - strand, within Psest_1221 at 1328.774 kb on + strand, within Psest_1221 at 1328.775 kb on - strand, within Psest_1221 at 1328.900 kb on + strand, within Psest_1221 at 1328.900 kb on + strand, within Psest_1221 at 1328.900 kb on + strand, within Psest_1221 at 1328.903 kb on + strand, within Psest_1221 at 1328.903 kb on + strand, within Psest_1221 at 1328.903 kb on + strand, within Psest_1221 at 1328.903 kb on + strand, within Psest_1221 at 1328.903 kb on + strand, within Psest_1221 at 1328.904 kb on - strand, within Psest_1221 at 1328.904 kb on - strand, within Psest_1221 at 1329.091 kb on + strand, within Psest_1221 at 1329.091 kb on + strand, within Psest_1221 at 1329.513 kb on + strand, within Psest_1222 at 1329.601 kb on - strand, within Psest_1222 at 1329.664 kb on - strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.789 kb on + strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.790 kb on - strand, within Psest_1222 at 1329.942 kb on + strand, within Psest_1222 at 1329.942 kb on + strand, within Psest_1222 at 1330.077 kb on + strand, within Psest_1222 at 1330.077 kb on + strand, within Psest_1222 at 1330.077 kb on + strand, within Psest_1222 at 1330.077 kb on + strand, within Psest_1222 at 1330.077 kb on + strand, within Psest_1222 at 1330.077 kb on + strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.078 kb on - strand, within Psest_1222 at 1330.158 kb on + strand, within Psest_1222 at 1330.158 kb on + strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222 at 1330.159 kb on - strand, within Psest_1222
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 1,327,515 + Psest_1219 0.89 -0.7 1,327,516 - Psest_1219 0.89 +1.5 1,327,785 - Psest_1220 0.19 -2.3 1,327,893 + Psest_1220 0.32 -1.4 1,327,894 - Psest_1220 0.32 -0.5 1,327,894 - Psest_1220 0.32 +0.9 1,327,894 - Psest_1220 0.32 +1.4 1,327,894 - Psest_1220 0.32 +1.1 1,327,984 - Psest_1220 0.43 +2.2 1,327,998 + Psest_1220 0.45 +0.9 1,328,088 + Psest_1220 0.55 +0.2 1,328,088 + Psest_1220 0.55 +0.9 1,328,088 + Psest_1220 0.55 -0.5 1,328,088 + Psest_1220 0.55 +0.5 1,328,088 + Psest_1220 0.55 -1.2 1,328,089 - Psest_1220 0.55 +0.1 1,328,089 - Psest_1220 0.55 -0.1 1,328,089 - Psest_1220 0.55 -0.1 1,328,089 - Psest_1220 0.55 -1.5 1,328,089 - Psest_1220 0.55 -2.6 1,328,089 - Psest_1220 0.55 +1.1 1,328,202 + Psest_1220 0.69 +0.5 1,328,202 + Psest_1220 0.69 +1.6 1,328,202 + Psest_1220 0.69 +2.6 1,328,203 - Psest_1220 0.69 -0.3 1,328,203 - Psest_1220 0.69 -1.6 1,328,435 + -0.9 1,328,436 - +1.3 1,328,594 - Psest_1221 0.16 -0.5 1,328,600 + Psest_1221 0.17 -2.0 1,328,600 + Psest_1221 0.17 -0.9 1,328,600 + Psest_1221 0.17 -0.5 1,328,601 - Psest_1221 0.17 -0.0 1,328,774 + Psest_1221 0.38 -0.4 1,328,775 - Psest_1221 0.38 -1.4 1,328,900 + Psest_1221 0.54 -1.1 1,328,900 + Psest_1221 0.54 -0.1 1,328,900 + Psest_1221 0.54 -1.2 1,328,903 + Psest_1221 0.54 -0.8 1,328,903 + Psest_1221 0.54 -1.8 1,328,903 + Psest_1221 0.54 -1.1 1,328,903 + Psest_1221 0.54 -2.4 1,328,903 + Psest_1221 0.54 -1.4 1,328,904 - Psest_1221 0.54 -0.9 1,328,904 - Psest_1221 0.54 -0.2 1,329,091 + Psest_1221 0.77 +0.9 1,329,091 + Psest_1221 0.77 -1.8 1,329,513 + Psest_1222 0.22 -2.3 1,329,601 - Psest_1222 0.31 -1.1 1,329,664 - Psest_1222 0.37 -1.2 1,329,789 + Psest_1222 0.50 +0.2 1,329,789 + Psest_1222 0.50 -0.5 1,329,789 + Psest_1222 0.50 +1.1 1,329,789 + Psest_1222 0.50 -0.3 1,329,789 + Psest_1222 0.50 -1.2 1,329,789 + Psest_1222 0.50 -1.7 1,329,789 + Psest_1222 0.50 +0.6 1,329,789 + Psest_1222 0.50 -0.5 1,329,789 + Psest_1222 0.50 -0.9 1,329,789 + Psest_1222 0.50 -2.7 1,329,789 + Psest_1222 0.50 -0.7 1,329,789 + Psest_1222 0.50 -0.5 1,329,790 - Psest_1222 0.50 -0.0 1,329,790 - Psest_1222 0.50 -2.2 1,329,790 - Psest_1222 0.50 +0.5 1,329,790 - Psest_1222 0.50 -2.4 1,329,790 - Psest_1222 0.50 +1.5 1,329,790 - Psest_1222 0.50 -0.9 1,329,790 - Psest_1222 0.50 -0.8 1,329,790 - Psest_1222 0.50 -0.9 1,329,790 - Psest_1222 0.50 -2.2 1,329,790 - Psest_1222 0.50 -1.1 1,329,790 - Psest_1222 0.50 -1.5 1,329,942 + Psest_1222 0.65 -2.1 1,329,942 + Psest_1222 0.65 -2.2 1,330,077 + Psest_1222 0.78 -0.5 1,330,077 + Psest_1222 0.78 +1.1 1,330,077 + Psest_1222 0.78 -0.3 1,330,077 + Psest_1222 0.78 -0.9 1,330,077 + Psest_1222 0.78 +1.0 1,330,077 + Psest_1222 0.78 +0.7 1,330,078 - Psest_1222 0.78 -0.2 1,330,078 - Psest_1222 0.78 +0.6 1,330,078 - Psest_1222 0.78 +0.5 1,330,078 - Psest_1222 0.78 -2.1 1,330,078 - Psest_1222 0.78 -0.7 1,330,078 - Psest_1222 0.78 +0.5 1,330,078 - Psest_1222 0.78 +0.1 1,330,158 + Psest_1222 0.86 +0.7 1,330,158 + Psest_1222 0.86 -2.5 1,330,159 - Psest_1222 0.87 -2.1 1,330,159 - Psest_1222 0.87 -0.7 1,330,159 - Psest_1222 0.87 -0.1 1,330,159 - Psest_1222 0.87 +0.3 1,330,159 - Psest_1222 0.87 -2.1 1,330,159 - Psest_1222 0.87 -0.7 1,330,159 - Psest_1222 0.87 +0.4 1,330,159 - Psest_1222 0.87 -0.3 1,330,159 - Psest_1222 0.87 -2.2 1,330,159 - Psest_1222 0.87 -0.2
Or see this region's nucleotide sequence