Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0983

Experiment: Def Benzalkonium Chloride 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_0981 and Psest_0982 are separated by 102 nucleotidesPsest_0982 and Psest_0983 are separated by 2 nucleotidesPsest_0983 and Psest_0985 are separated by 114 nucleotidesPsest_0985 and Psest_0986 are separated by 164 nucleotides Psest_0981: Psest_0981 - translation initiation factor IF-2, at 1,062,691 to 1,065,192 _0981 Psest_0982: Psest_0982 - ribosome-binding factor A, at 1,065,295 to 1,065,684 _0982 Psest_0983: Psest_0983 - tRNA pseudouridine 55 synthase, at 1,065,687 to 1,066,604 _0983 Psest_0985: Psest_0985 - ribosomal protein S15, bacterial/organelle, at 1,066,719 to 1,066,988 _0985 Psest_0986: Psest_0986 - polyribonucleotide nucleotidyltransferase, at 1,067,153 to 1,069,258 _0986 Position (kb) 1065 1066 1067Strain fitness (log2 ratio) -1 0 1 2at 1065.190 kb on + strandat 1065.278 kb on + strandat 1066.671 kb on + strandat 1066.674 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml
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1,065,190 + +1.8
1,065,278 + +0.7
1,066,671 + +2.4
1,066,674 + +1.7

Or see this region's nucleotide sequence