Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0709 and Psest_0710 overlap by 4 nucleotides Psest_0710 and Psest_0711 are separated by 166 nucleotides Psest_0711 and Psest_0712 are separated by 196 nucleotides Psest_0712 and Psest_0713 are separated by 9 nucleotides Psest_0713 and Psest_0714 are separated by 5 nucleotides Psest_0714 and Psest_0715 are separated by 113 nucleotides
Psest_0709: Psest_0709 - pseudouridine synthase, RluA family, at 778,325 to 779,452
_0709
Psest_0710: Psest_0710 - uncharacterized protein, YfiH family, at 779,449 to 780,186
_0710
Psest_0711: Psest_0711 - ATP-dependent chaperone ClpB, at 780,353 to 782,917
_0711
Psest_0712: Psest_0712 - tRNA_Asn_GTT, at 783,114 to 783,189
_0712
Psest_0713: Psest_0713 - tRNA_Pro_TGG, at 783,199 to 783,275
_0713
Psest_0714: Psest_0714 - tRNA_Lys_TTT, at 783,281 to 783,356
_0714
Psest_0715: Psest_0715 - NADH dehydrogenase, FAD-containing subunit, at 783,470 to 784,765
_0715
Position (kb) 780
781
782
783 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.282 kb on + strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.283 kb on - strand at 780.302 kb on + strand at 780.302 kb on + strand at 780.302 kb on + strand at 780.302 kb on + strand at 780.302 kb on + strand at 780.303 kb on - strand at 780.334 kb on + strand at 780.665 kb on + strand, within Psest_0711 at 780.665 kb on + strand, within Psest_0711 at 780.666 kb on - strand, within Psest_0711 at 780.666 kb on - strand, within Psest_0711 at 780.666 kb on - strand, within Psest_0711 at 780.666 kb on - strand, within Psest_0711 at 780.709 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.842 kb on + strand, within Psest_0711 at 780.843 kb on - strand, within Psest_0711 at 780.843 kb on - strand, within Psest_0711 at 780.843 kb on - strand, within Psest_0711 at 781.195 kb on + strand, within Psest_0711 at 781.195 kb on + strand, within Psest_0711 at 781.196 kb on - strand, within Psest_0711 at 781.292 kb on - strand, within Psest_0711 at 781.316 kb on + strand, within Psest_0711 at 781.317 kb on - strand, within Psest_0711 at 781.317 kb on - strand, within Psest_0711 at 781.317 kb on - strand, within Psest_0711 at 781.317 kb on - strand, within Psest_0711 at 781.359 kb on + strand, within Psest_0711 at 781.359 kb on + strand, within Psest_0711 at 781.421 kb on + strand, within Psest_0711 at 781.428 kb on + strand, within Psest_0711 at 781.429 kb on - strand, within Psest_0711 at 781.429 kb on - strand, within Psest_0711 at 781.429 kb on - strand, within Psest_0711 at 781.429 kb on - strand, within Psest_0711 at 781.490 kb on + strand, within Psest_0711 at 781.490 kb on + strand, within Psest_0711 at 781.490 kb on + strand, within Psest_0711 at 781.490 kb on + strand, within Psest_0711 at 781.490 kb on + strand, within Psest_0711 at 781.491 kb on - strand, within Psest_0711 at 781.491 kb on - strand, within Psest_0711 at 781.491 kb on - strand, within Psest_0711 at 781.715 kb on + strand, within Psest_0711 at 781.867 kb on + strand, within Psest_0711 at 782.356 kb on + strand, within Psest_0711 at 782.924 kb on + strand at 782.924 kb on + strand at 783.013 kb on + strand at 783.014 kb on - strand at 783.030 kb on - strand at 783.357 kb on + strand at 783.357 kb on + strand at 783.357 kb on + strand at 783.535 kb on + strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.583 kb on + strand at 783.583 kb on + strand at 783.584 kb on - strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.696 kb on + strand, within Psest_0715 at 783.696 kb on + strand, within Psest_0715 at 783.696 kb on + strand, within Psest_0715 at 783.696 kb on + strand, within Psest_0715 at 783.702 kb on + strand, within Psest_0715
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 780,282 + +0.0 780,282 + +1.5 780,282 + -2.1 780,282 + +1.3 780,282 + -1.0 780,282 + -0.7 780,282 + +0.3 780,282 + +2.3 780,282 + +0.0 780,282 + +1.5 780,282 + +0.2 780,282 + +0.8 780,282 + +0.7 780,282 + +1.2 780,283 - -0.3 780,283 - -0.3 780,283 - +0.0 780,283 - -0.3 780,283 - -2.8 780,283 - +0.0 780,283 - -0.3 780,283 - +0.1 780,283 - +0.6 780,283 - -0.2 780,283 - -0.7 780,283 - +0.0 780,283 - -3.5 780,283 - +1.3 780,283 - -1.1 780,283 - +0.7 780,302 + -0.3 780,302 + +2.2 780,302 + -1.0 780,302 + +0.2 780,302 + +1.2 780,303 - -0.8 780,334 + -1.1 780,665 + Psest_0711 0.12 +2.0 780,665 + Psest_0711 0.12 -0.9 780,666 - Psest_0711 0.12 +1.0 780,666 - Psest_0711 0.12 +1.0 780,666 - Psest_0711 0.12 +1.2 780,666 - Psest_0711 0.12 +0.5 780,709 + Psest_0711 0.14 +0.1 780,842 + Psest_0711 0.19 +0.5 780,842 + Psest_0711 0.19 -0.3 780,842 + Psest_0711 0.19 +1.2 780,842 + Psest_0711 0.19 -1.8 780,842 + Psest_0711 0.19 +0.2 780,842 + Psest_0711 0.19 +0.1 780,842 + Psest_0711 0.19 +0.4 780,842 + Psest_0711 0.19 +0.5 780,842 + Psest_0711 0.19 -0.4 780,842 + Psest_0711 0.19 +0.1 780,843 - Psest_0711 0.19 +2.0 780,843 - Psest_0711 0.19 -0.9 780,843 - Psest_0711 0.19 -2.0 781,195 + Psest_0711 0.33 +0.3 781,195 + Psest_0711 0.33 +2.0 781,196 - Psest_0711 0.33 +1.4 781,292 - Psest_0711 0.37 -1.0 781,316 + Psest_0711 0.38 +0.4 781,317 - Psest_0711 0.38 +0.5 781,317 - Psest_0711 0.38 +1.7 781,317 - Psest_0711 0.38 -2.3 781,317 - Psest_0711 0.38 +0.1 781,359 + Psest_0711 0.39 -0.5 781,359 + Psest_0711 0.39 +0.4 781,421 + Psest_0711 0.42 +0.9 781,428 + Psest_0711 0.42 +0.6 781,429 - Psest_0711 0.42 +0.7 781,429 - Psest_0711 0.42 +1.8 781,429 - Psest_0711 0.42 +0.4 781,429 - Psest_0711 0.42 +0.7 781,490 + Psest_0711 0.44 +1.3 781,490 + Psest_0711 0.44 +0.4 781,490 + Psest_0711 0.44 +1.0 781,490 + Psest_0711 0.44 +0.9 781,490 + Psest_0711 0.44 +0.3 781,491 - Psest_0711 0.44 +1.0 781,491 - Psest_0711 0.44 +0.4 781,491 - Psest_0711 0.44 +0.8 781,715 + Psest_0711 0.53 +0.7 781,867 + Psest_0711 0.59 -0.0 782,356 + Psest_0711 0.78 +2.0 782,924 + +1.6 782,924 + -0.1 783,013 + +0.7 783,014 - +0.6 783,030 - -1.3 783,357 + +1.9 783,357 + +1.2 783,357 + +0.7 783,535 + +0.4 783,550 - +0.4 783,550 - +1.7 783,550 - +1.3 783,550 - +1.2 783,550 - +2.0 783,550 - +2.0 783,583 + +0.7 783,583 + -0.4 783,584 - +0.9 783,585 + +0.8 783,585 + +0.6 783,585 + +0.1 783,585 + +0.0 783,585 + +0.7 783,585 + +0.4 783,586 - +0.6 783,586 - +0.2 783,586 - +1.0 783,586 - +0.9 783,586 - -0.5 783,586 - +1.0 783,586 - +1.3 783,586 - +0.9 783,586 - -0.4 783,586 - +0.6 783,586 - +0.6 783,696 + Psest_0715 0.17 -0.2 783,696 + Psest_0715 0.17 +0.8 783,696 + Psest_0715 0.17 +1.4 783,696 + Psest_0715 0.17 +1.1 783,702 + Psest_0715 0.18 +1.3
Or see this region's nucleotide sequence