Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0691 and Psest_0692 overlap by 4 nucleotides Psest_0692 and Psest_0693 are separated by 174 nucleotides Psest_0693 and Psest_0694 are separated by 180 nucleotides Psest_0694 and Psest_0695 are separated by 28 nucleotides Psest_0695 and Psest_0696 are separated by 34 nucleotides
Psest_0691: Psest_0691 - ribonuclease R, at 753,965 to 756,466
_0691
Psest_0692: Psest_0692 - rRNA methylase, putative, group 3, at 756,463 to 757,218
_0692
Psest_0693: Psest_0693 - His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 757,393 to 759,555
_0693
Psest_0694: Psest_0694 - ribosomal protein S6, at 759,736 to 760,152
_0694
Psest_0695: Psest_0695 - ribosomal protein S18, at 760,181 to 760,411
_0695
Psest_0696: Psest_0696 - hypothetical protein, at 760,446 to 761,339
_0696
Position (kb) 757
758
759
760 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 756.805 kb on - strand, within Psest_0692 at 756.855 kb on + strand, within Psest_0692 at 757.015 kb on + strand, within Psest_0692 at 757.047 kb on + strand, within Psest_0692 at 757.047 kb on + strand, within Psest_0692 at 757.314 kb on + strand at 757.314 kb on + strand at 757.315 kb on - strand at 757.392 kb on + strand at 757.392 kb on + strand at 757.392 kb on + strand at 757.392 kb on + strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.393 kb on - strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.444 kb on + strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.445 kb on - strand at 757.492 kb on + strand at 757.492 kb on + strand at 757.492 kb on + strand at 757.493 kb on - strand at 757.493 kb on - strand at 757.493 kb on - strand at 757.493 kb on - strand at 757.493 kb on - strand at 757.493 kb on - strand at 757.624 kb on - strand, within Psest_0693 at 757.624 kb on - strand, within Psest_0693 at 757.624 kb on - strand, within Psest_0693 at 757.660 kb on + strand, within Psest_0693 at 757.692 kb on + strand, within Psest_0693 at 757.692 kb on + strand, within Psest_0693 at 757.692 kb on + strand, within Psest_0693 at 757.692 kb on + strand, within Psest_0693 at 757.693 kb on - strand, within Psest_0693 at 757.693 kb on - strand, within Psest_0693 at 757.693 kb on - strand, within Psest_0693 at 757.693 kb on - strand, within Psest_0693 at 757.693 kb on - strand, within Psest_0693 at 757.696 kb on + strand, within Psest_0693 at 757.696 kb on + strand, within Psest_0693 at 757.696 kb on + strand, within Psest_0693 at 757.696 kb on + strand, within Psest_0693 at 757.697 kb on - strand, within Psest_0693 at 757.803 kb on - strand, within Psest_0693 at 757.803 kb on - strand, within Psest_0693 at 757.803 kb on - strand, within Psest_0693 at 757.803 kb on - strand, within Psest_0693 at 757.969 kb on + strand, within Psest_0693 at 757.969 kb on + strand, within Psest_0693 at 757.969 kb on + strand, within Psest_0693 at 757.969 kb on + strand, within Psest_0693 at 757.970 kb on - strand, within Psest_0693 at 758.093 kb on - strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.110 kb on + strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.111 kb on - strand, within Psest_0693 at 758.112 kb on + strand, within Psest_0693 at 758.112 kb on + strand, within Psest_0693 at 758.112 kb on + strand, within Psest_0693 at 758.112 kb on + strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.113 kb on - strand, within Psest_0693 at 758.126 kb on + strand, within Psest_0693 at 758.570 kb on + strand, within Psest_0693 at 758.570 kb on + strand, within Psest_0693 at 758.570 kb on + strand, within Psest_0693 at 758.570 kb on + strand, within Psest_0693 at 758.571 kb on - strand, within Psest_0693 at 758.571 kb on - strand, within Psest_0693 at 758.571 kb on - strand, within Psest_0693 at 758.571 kb on - strand, within Psest_0693 at 758.649 kb on - strand, within Psest_0693 at 758.649 kb on - strand, within Psest_0693 at 758.649 kb on - strand, within Psest_0693 at 758.649 kb on - strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.986 kb on + strand, within Psest_0693 at 758.987 kb on - strand, within Psest_0693 at 758.987 kb on - strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.487 kb on + strand at 759.487 kb on + strand at 759.488 kb on - strand at 759.549 kb on + strand at 759.549 kb on + strand at 759.549 kb on + strand at 759.550 kb on - strand at 759.556 kb on + strand at 759.556 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 756,805 - Psest_0692 0.45 +1.2 756,855 + Psest_0692 0.52 +2.4 757,015 + Psest_0692 0.73 +1.8 757,047 + Psest_0692 0.77 +2.5 757,047 + Psest_0692 0.77 +3.6 757,314 + +1.2 757,314 + +0.0 757,315 - +0.7 757,392 + -2.4 757,392 + -2.9 757,392 + -1.1 757,392 + -1.9 757,393 - +2.2 757,393 - +2.4 757,393 - +2.3 757,393 - +2.7 757,393 - +2.6 757,393 - +2.7 757,393 - +2.6 757,393 - +2.1 757,393 - +3.2 757,393 - +2.4 757,393 - +2.4 757,393 - +2.7 757,393 - +2.3 757,393 - +2.2 757,393 - +2.3 757,393 - +2.2 757,444 + -2.2 757,444 + -1.4 757,444 + -4.0 757,444 + -1.2 757,444 + -0.8 757,444 + -3.0 757,444 + -2.4 757,444 + +0.4 757,444 + -1.2 757,445 - +3.5 757,445 - +3.4 757,445 - +3.4 757,445 - +3.2 757,445 - +3.3 757,445 - +3.2 757,445 - +3.6 757,445 - +3.8 757,492 + -2.1 757,492 + -2.2 757,492 + -3.8 757,493 - +3.3 757,493 - +3.2 757,493 - +3.5 757,493 - +3.4 757,493 - +3.3 757,493 - +3.6 757,624 - Psest_0693 0.11 +3.3 757,624 - Psest_0693 0.11 +2.9 757,624 - Psest_0693 0.11 +3.0 757,660 + Psest_0693 0.12 -1.6 757,692 + Psest_0693 0.14 -1.3 757,692 + Psest_0693 0.14 -1.6 757,692 + Psest_0693 0.14 +0.2 757,692 + Psest_0693 0.14 -2.3 757,693 - Psest_0693 0.14 +3.4 757,693 - Psest_0693 0.14 +2.8 757,693 - Psest_0693 0.14 +3.4 757,693 - Psest_0693 0.14 +3.1 757,693 - Psest_0693 0.14 +1.6 757,696 + Psest_0693 0.14 -1.8 757,696 + Psest_0693 0.14 -1.1 757,696 + Psest_0693 0.14 -2.5 757,696 + Psest_0693 0.14 -1.4 757,697 - Psest_0693 0.14 +3.4 757,803 - Psest_0693 0.19 +0.8 757,803 - Psest_0693 0.19 +0.1 757,803 - Psest_0693 0.19 +0.4 757,803 - Psest_0693 0.19 +0.5 757,969 + Psest_0693 0.27 -3.1 757,969 + Psest_0693 0.27 -4.3 757,969 + Psest_0693 0.27 -4.1 757,969 + Psest_0693 0.27 -3.3 757,970 - Psest_0693 0.27 +3.9 758,093 - Psest_0693 0.32 +2.9 758,110 + Psest_0693 0.33 -2.4 758,110 + Psest_0693 0.33 -2.4 758,110 + Psest_0693 0.33 -1.9 758,110 + Psest_0693 0.33 -0.6 758,110 + Psest_0693 0.33 -0.8 758,110 + Psest_0693 0.33 -0.4 758,110 + Psest_0693 0.33 +0.0 758,110 + Psest_0693 0.33 -2.4 758,110 + Psest_0693 0.33 -2.6 758,110 + Psest_0693 0.33 -1.9 758,110 + Psest_0693 0.33 -3.0 758,110 + Psest_0693 0.33 -3.1 758,110 + Psest_0693 0.33 -3.9 758,110 + Psest_0693 0.33 -2.3 758,110 + Psest_0693 0.33 -2.7 758,111 - Psest_0693 0.33 +1.6 758,111 - Psest_0693 0.33 +2.8 758,111 - Psest_0693 0.33 +3.0 758,111 - Psest_0693 0.33 +2.5 758,111 - Psest_0693 0.33 +3.1 758,111 - Psest_0693 0.33 +3.0 758,111 - Psest_0693 0.33 +2.8 758,111 - Psest_0693 0.33 +3.0 758,111 - Psest_0693 0.33 +2.1 758,111 - Psest_0693 0.33 +2.6 758,111 - Psest_0693 0.33 +2.6 758,111 - Psest_0693 0.33 +2.8 758,111 - Psest_0693 0.33 +3.0 758,111 - Psest_0693 0.33 +2.9 758,111 - Psest_0693 0.33 +2.9 758,111 - Psest_0693 0.33 +2.7 758,111 - Psest_0693 0.33 +3.4 758,111 - Psest_0693 0.33 +2.8 758,111 - Psest_0693 0.33 +3.7 758,111 - Psest_0693 0.33 +2.7 758,111 - Psest_0693 0.33 +2.8 758,111 - Psest_0693 0.33 +3.1 758,111 - Psest_0693 0.33 +2.9 758,111 - Psest_0693 0.33 +3.2 758,111 - Psest_0693 0.33 +2.9 758,111 - Psest_0693 0.33 +2.6 758,111 - Psest_0693 0.33 +2.4 758,111 - Psest_0693 0.33 +2.9 758,112 + Psest_0693 0.33 -2.1 758,112 + Psest_0693 0.33 -4.2 758,112 + Psest_0693 0.33 -2.8 758,112 + Psest_0693 0.33 -1.8 758,113 - Psest_0693 0.33 +1.4 758,113 - Psest_0693 0.33 +1.8 758,113 - Psest_0693 0.33 -0.8 758,113 - Psest_0693 0.33 +1.6 758,113 - Psest_0693 0.33 +1.7 758,113 - Psest_0693 0.33 +2.0 758,113 - Psest_0693 0.33 +0.6 758,113 - Psest_0693 0.33 +2.0 758,113 - Psest_0693 0.33 +1.2 758,126 + Psest_0693 0.34 -3.0 758,570 + Psest_0693 0.54 -2.6 758,570 + Psest_0693 0.54 -3.0 758,570 + Psest_0693 0.54 -3.6 758,570 + Psest_0693 0.54 -3.6 758,571 - Psest_0693 0.54 -0.4 758,571 - Psest_0693 0.54 -0.0 758,571 - Psest_0693 0.54 -0.4 758,571 - Psest_0693 0.54 +0.1 758,649 - Psest_0693 0.58 +0.6 758,649 - Psest_0693 0.58 +1.2 758,649 - Psest_0693 0.58 +1.8 758,649 - Psest_0693 0.58 +2.0 758,860 + Psest_0693 0.68 -2.3 758,860 + Psest_0693 0.68 -2.1 758,860 + Psest_0693 0.68 -1.8 758,860 + Psest_0693 0.68 -1.3 758,861 - Psest_0693 0.68 +2.4 758,861 - Psest_0693 0.68 +2.0 758,861 - Psest_0693 0.68 +2.4 758,861 - Psest_0693 0.68 +1.8 758,861 - Psest_0693 0.68 +2.5 758,861 - Psest_0693 0.68 +2.5 758,861 - Psest_0693 0.68 +2.4 758,861 - Psest_0693 0.68 +2.2 758,861 - Psest_0693 0.68 +3.1 758,861 - Psest_0693 0.68 +2.1 758,986 + Psest_0693 0.74 +1.5 758,987 - Psest_0693 0.74 +4.0 758,987 - Psest_0693 0.74 +3.4 759,077 + Psest_0693 0.78 +3.5 759,077 + Psest_0693 0.78 +1.8 759,077 + Psest_0693 0.78 -1.1 759,077 + Psest_0693 0.78 -0.0 759,078 - Psest_0693 0.78 +0.9 759,078 - Psest_0693 0.78 +0.1 759,078 - Psest_0693 0.78 +1.8 759,078 - Psest_0693 0.78 +0.4 759,078 - Psest_0693 0.78 +0.1 759,078 - Psest_0693 0.78 +0.6 759,078 - Psest_0693 0.78 +1.4 759,078 - Psest_0693 0.78 -0.1 759,078 - Psest_0693 0.78 -0.0 759,078 - Psest_0693 0.78 -0.1 759,078 - Psest_0693 0.78 +0.4 759,329 + Psest_0693 0.90 +2.3 759,329 + Psest_0693 0.90 +3.7 759,329 + Psest_0693 0.90 +3.5 759,329 + Psest_0693 0.90 +3.6 759,329 + Psest_0693 0.90 +3.7 759,329 + Psest_0693 0.90 +4.0 759,329 + Psest_0693 0.90 +3.7 759,330 - Psest_0693 0.90 +3.6 759,330 - Psest_0693 0.90 +3.5 759,330 - Psest_0693 0.90 +3.6 759,330 - Psest_0693 0.90 +3.7 759,330 - Psest_0693 0.90 +3.1 759,330 - Psest_0693 0.90 +3.5 759,330 - Psest_0693 0.90 +4.0 759,330 - Psest_0693 0.90 +3.6 759,330 - Psest_0693 0.90 +3.5 759,330 - Psest_0693 0.90 +4.0 759,330 - Psest_0693 0.90 +3.3 759,487 + +3.6 759,487 + +3.4 759,488 - +3.4 759,549 + +0.8 759,549 + +2.0 759,549 + +0.3 759,550 - +0.4 759,556 + -0.3 759,556 + +1.9 759,615 + -1.0 759,615 + -1.0 759,615 + +1.0 759,615 + -1.4
Or see this region's nucleotide sequence