Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3979 and Psest_3980 are separated by 120 nucleotides Psest_3980 and Psest_3981 are separated by 130 nucleotides Psest_3981 and Psest_3982 are separated by 42 nucleotides
Psest_3979: Psest_3979 - Fructose-2,6-bisphosphatase, at 4,147,482 to 4,148,042
_3979
Psest_3980: Psest_3980 - Sigma 54 modulation protein / S30EA ribosomal protein., at 4,148,163 to 4,148,585
_3980
Psest_3981: Psest_3981 - hypothetical protein, at 4,148,716 to 4,149,294
_3981
Psest_3982: Psest_3982 - hypothetical protein, at 4,149,337 to 4,150,647
_3982
Position (kb)
4148
4149
4150 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4147.951 kb on + strand, within Psest_3979 at 4147.952 kb on - strand, within Psest_3979 at 4147.952 kb on - strand, within Psest_3979 at 4148.462 kb on + strand, within Psest_3980 at 4148.558 kb on + strand at 4148.558 kb on + strand at 4148.558 kb on + strand at 4148.558 kb on + strand at 4148.558 kb on + strand at 4148.586 kb on - strand at 4148.586 kb on - strand at 4148.591 kb on + strand at 4148.600 kb on + strand at 4148.600 kb on + strand at 4148.600 kb on + strand at 4148.600 kb on + strand at 4148.601 kb on - strand at 4148.601 kb on - strand at 4148.601 kb on - strand at 4148.601 kb on - strand at 4148.601 kb on - strand at 4148.609 kb on + strand at 4148.609 kb on + strand at 4148.609 kb on + strand at 4148.609 kb on + strand at 4148.609 kb on + strand at 4148.609 kb on + strand at 4148.609 kb on + strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.610 kb on - strand at 4148.613 kb on + strand at 4148.613 kb on + strand at 4148.613 kb on + strand at 4148.613 kb on + strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.614 kb on - strand at 4148.616 kb on + strand at 4148.616 kb on + strand at 4148.616 kb on + strand at 4148.616 kb on + strand at 4148.616 kb on + strand at 4148.617 kb on - strand at 4148.617 kb on - strand at 4148.617 kb on - strand at 4148.708 kb on + strand at 4148.708 kb on + strand at 4148.709 kb on - strand at 4148.709 kb on - strand at 4148.709 kb on - strand at 4148.760 kb on - strand at 4148.760 kb on - strand at 4148.760 kb on - strand at 4148.804 kb on + strand, within Psest_3981 at 4148.804 kb on + strand, within Psest_3981 at 4148.804 kb on + strand, within Psest_3981 at 4148.805 kb on - strand, within Psest_3981 at 4148.957 kb on + strand, within Psest_3981 at 4148.958 kb on - strand, within Psest_3981 at 4148.990 kb on + strand, within Psest_3981 at 4149.008 kb on + strand, within Psest_3981 at 4149.008 kb on + strand, within Psest_3981 at 4149.008 kb on + strand, within Psest_3981 at 4149.008 kb on + strand, within Psest_3981 at 4149.008 kb on + strand, within Psest_3981 at 4149.008 kb on + strand, within Psest_3981 at 4149.009 kb on - strand, within Psest_3981 at 4149.009 kb on - strand, within Psest_3981 at 4149.009 kb on - strand, within Psest_3981 at 4149.015 kb on + strand, within Psest_3981 at 4149.015 kb on + strand, within Psest_3981 at 4149.015 kb on + strand, within Psest_3981 at 4149.016 kb on - strand, within Psest_3981 at 4149.016 kb on - strand, within Psest_3981 at 4149.016 kb on - strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.017 kb on + strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.018 kb on - strand, within Psest_3981 at 4149.042 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.050 kb on + strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.051 kb on - strand, within Psest_3981 at 4149.057 kb on + strand, within Psest_3981 at 4149.057 kb on + strand, within Psest_3981 at 4149.057 kb on + strand, within Psest_3981 at 4149.057 kb on + strand, within Psest_3981 at 4149.057 kb on + strand, within Psest_3981 at 4149.057 kb on + strand, within Psest_3981 at 4149.058 kb on - strand, within Psest_3981 at 4149.058 kb on - strand, within Psest_3981 at 4149.058 kb on - strand, within Psest_3981 at 4149.058 kb on - strand, within Psest_3981 at 4149.061 kb on + strand, within Psest_3981 at 4149.062 kb on - strand, within Psest_3981 at 4149.137 kb on + strand, within Psest_3981 at 4149.137 kb on + strand, within Psest_3981 at 4149.137 kb on + strand, within Psest_3981 at 4149.138 kb on - strand, within Psest_3981 at 4149.309 kb on + strand at 4149.309 kb on + strand at 4149.430 kb on + strand at 4149.431 kb on - strand at 4149.522 kb on - strand, within Psest_3982 at 4149.522 kb on - strand, within Psest_3982 at 4149.522 kb on - strand, within Psest_3982 at 4149.554 kb on + strand, within Psest_3982 at 4149.554 kb on + strand, within Psest_3982 at 4149.554 kb on + strand, within Psest_3982 at 4149.554 kb on + strand, within Psest_3982 at 4149.554 kb on + strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.555 kb on - strand, within Psest_3982 at 4149.614 kb on + strand, within Psest_3982 at 4149.652 kb on + strand, within Psest_3982 at 4149.888 kb on + strand, within Psest_3982 at 4149.889 kb on - strand, within Psest_3982 at 4149.936 kb on - strand, within Psest_3982 at 4150.058 kb on + strand, within Psest_3982 at 4150.058 kb on + strand, within Psest_3982 at 4150.058 kb on + strand, within Psest_3982 at 4150.059 kb on - strand, within Psest_3982 at 4150.059 kb on - strand, within Psest_3982 at 4150.059 kb on - strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.275 kb on - strand, within Psest_3982 at 4150.275 kb on - strand, within Psest_3982 at 4150.275 kb on - strand, within Psest_3982 at 4150.292 kb on + strand, within Psest_3982 at 4150.292 kb on + strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 4,147,951 + Psest_3979 0.84 +0.8 4,147,952 - Psest_3979 0.84 -1.4 4,147,952 - Psest_3979 0.84 -0.1 4,148,462 + Psest_3980 0.71 +0.6 4,148,558 + +0.2 4,148,558 + +0.9 4,148,558 + -0.1 4,148,558 + -1.3 4,148,558 + -3.3 4,148,586 - +0.6 4,148,586 - -0.6 4,148,591 + +0.7 4,148,600 + -0.1 4,148,600 + +0.7 4,148,600 + -1.1 4,148,600 + -2.5 4,148,601 - +1.7 4,148,601 - +0.1 4,148,601 - +0.1 4,148,601 - +1.2 4,148,601 - -0.2 4,148,609 + -2.5 4,148,609 + +0.7 4,148,609 + +0.6 4,148,609 + -2.0 4,148,609 + -0.3 4,148,609 + -1.4 4,148,609 + -0.3 4,148,610 - +0.8 4,148,610 - +1.1 4,148,610 - +1.3 4,148,610 - +0.2 4,148,610 - +0.9 4,148,610 - +1.4 4,148,610 - +0.3 4,148,610 - -0.5 4,148,610 - +0.8 4,148,613 + -0.5 4,148,613 + -0.8 4,148,613 + +0.3 4,148,613 + +0.1 4,148,614 - +0.8 4,148,614 - +1.7 4,148,614 - -0.3 4,148,614 - +0.9 4,148,614 - -0.9 4,148,614 - +1.5 4,148,614 - -1.2 4,148,614 - -0.6 4,148,614 - +0.4 4,148,614 - +1.5 4,148,614 - -0.1 4,148,614 - +0.0 4,148,614 - -1.9 4,148,616 + +0.1 4,148,616 + +0.5 4,148,616 + -0.3 4,148,616 + -0.1 4,148,616 + -0.8 4,148,617 - +0.2 4,148,617 - +0.4 4,148,617 - +0.5 4,148,708 + +0.9 4,148,708 + +0.5 4,148,709 - -0.0 4,148,709 - -0.3 4,148,709 - -0.6 4,148,760 - -0.9 4,148,760 - -0.1 4,148,760 - -0.5 4,148,804 + Psest_3981 0.15 -0.9 4,148,804 + Psest_3981 0.15 +0.3 4,148,804 + Psest_3981 0.15 +1.1 4,148,805 - Psest_3981 0.15 -2.1 4,148,957 + Psest_3981 0.42 -1.6 4,148,958 - Psest_3981 0.42 -1.6 4,148,990 + Psest_3981 0.47 -0.6 4,149,008 + Psest_3981 0.50 -1.1 4,149,008 + Psest_3981 0.50 -0.7 4,149,008 + Psest_3981 0.50 +0.9 4,149,008 + Psest_3981 0.50 +0.7 4,149,008 + Psest_3981 0.50 -0.5 4,149,008 + Psest_3981 0.50 -0.2 4,149,009 - Psest_3981 0.51 -0.9 4,149,009 - Psest_3981 0.51 -2.1 4,149,009 - Psest_3981 0.51 -1.4 4,149,015 + Psest_3981 0.52 +0.8 4,149,015 + Psest_3981 0.52 -0.3 4,149,015 + Psest_3981 0.52 +0.6 4,149,016 - Psest_3981 0.52 -2.5 4,149,016 - Psest_3981 0.52 +0.7 4,149,016 - Psest_3981 0.52 -0.5 4,149,017 + Psest_3981 0.52 -0.3 4,149,017 + Psest_3981 0.52 -0.6 4,149,017 + Psest_3981 0.52 +0.0 4,149,017 + Psest_3981 0.52 -0.1 4,149,017 + Psest_3981 0.52 -0.8 4,149,017 + Psest_3981 0.52 -1.1 4,149,017 + Psest_3981 0.52 -0.9 4,149,017 + Psest_3981 0.52 +0.2 4,149,017 + Psest_3981 0.52 +1.7 4,149,017 + Psest_3981 0.52 -1.1 4,149,017 + Psest_3981 0.52 -1.1 4,149,017 + Psest_3981 0.52 +0.1 4,149,017 + Psest_3981 0.52 -0.3 4,149,017 + Psest_3981 0.52 +0.7 4,149,017 + Psest_3981 0.52 +0.2 4,149,017 + Psest_3981 0.52 +1.4 4,149,017 + Psest_3981 0.52 -0.1 4,149,017 + Psest_3981 0.52 +0.3 4,149,017 + Psest_3981 0.52 -1.2 4,149,017 + Psest_3981 0.52 +0.2 4,149,017 + Psest_3981 0.52 +0.4 4,149,018 - Psest_3981 0.52 -1.1 4,149,018 - Psest_3981 0.52 -1.2 4,149,018 - Psest_3981 0.52 -1.4 4,149,018 - Psest_3981 0.52 -0.5 4,149,018 - Psest_3981 0.52 -1.5 4,149,018 - Psest_3981 0.52 -0.3 4,149,018 - Psest_3981 0.52 -0.8 4,149,018 - Psest_3981 0.52 -0.6 4,149,018 - Psest_3981 0.52 -1.2 4,149,018 - Psest_3981 0.52 -1.4 4,149,018 - Psest_3981 0.52 -0.0 4,149,018 - Psest_3981 0.52 +1.4 4,149,018 - Psest_3981 0.52 -0.9 4,149,018 - Psest_3981 0.52 -1.2 4,149,018 - Psest_3981 0.52 +1.2 4,149,018 - Psest_3981 0.52 -1.1 4,149,018 - Psest_3981 0.52 -0.8 4,149,018 - Psest_3981 0.52 -1.7 4,149,018 - Psest_3981 0.52 +0.4 4,149,018 - Psest_3981 0.52 -0.7 4,149,018 - Psest_3981 0.52 +0.2 4,149,018 - Psest_3981 0.52 -0.5 4,149,018 - Psest_3981 0.52 +0.2 4,149,018 - Psest_3981 0.52 -2.2 4,149,042 + Psest_3981 0.56 -0.6 4,149,050 + Psest_3981 0.58 -0.6 4,149,050 + Psest_3981 0.58 +1.8 4,149,050 + Psest_3981 0.58 +0.6 4,149,050 + Psest_3981 0.58 -0.5 4,149,050 + Psest_3981 0.58 -0.2 4,149,050 + Psest_3981 0.58 +0.4 4,149,050 + Psest_3981 0.58 +0.6 4,149,050 + Psest_3981 0.58 +0.0 4,149,050 + Psest_3981 0.58 -0.6 4,149,050 + Psest_3981 0.58 -0.4 4,149,050 + Psest_3981 0.58 +0.9 4,149,050 + Psest_3981 0.58 -0.1 4,149,050 + Psest_3981 0.58 -0.1 4,149,050 + Psest_3981 0.58 -0.1 4,149,050 + Psest_3981 0.58 +0.8 4,149,051 - Psest_3981 0.58 -2.2 4,149,051 - Psest_3981 0.58 -1.1 4,149,051 - Psest_3981 0.58 -0.5 4,149,051 - Psest_3981 0.58 +0.2 4,149,051 - Psest_3981 0.58 -0.8 4,149,051 - Psest_3981 0.58 -0.9 4,149,051 - Psest_3981 0.58 +0.1 4,149,051 - Psest_3981 0.58 -0.4 4,149,051 - Psest_3981 0.58 +0.9 4,149,051 - Psest_3981 0.58 -0.2 4,149,051 - Psest_3981 0.58 -2.9 4,149,051 - Psest_3981 0.58 -0.8 4,149,051 - Psest_3981 0.58 +0.8 4,149,051 - Psest_3981 0.58 +0.5 4,149,057 + Psest_3981 0.59 -2.9 4,149,057 + Psest_3981 0.59 +0.7 4,149,057 + Psest_3981 0.59 -0.1 4,149,057 + Psest_3981 0.59 -0.9 4,149,057 + Psest_3981 0.59 +0.8 4,149,057 + Psest_3981 0.59 +0.3 4,149,058 - Psest_3981 0.59 -1.4 4,149,058 - Psest_3981 0.59 -2.6 4,149,058 - Psest_3981 0.59 -1.9 4,149,058 - Psest_3981 0.59 -2.8 4,149,061 + Psest_3981 0.60 +0.7 4,149,062 - Psest_3981 0.60 -1.1 4,149,137 + Psest_3981 0.73 -0.5 4,149,137 + Psest_3981 0.73 +0.9 4,149,137 + Psest_3981 0.73 +0.1 4,149,138 - Psest_3981 0.73 -1.1 4,149,309 + +0.8 4,149,309 + -0.1 4,149,430 + -0.3 4,149,431 - +0.7 4,149,522 - Psest_3982 0.14 -1.2 4,149,522 - Psest_3982 0.14 +0.7 4,149,522 - Psest_3982 0.14 +0.2 4,149,554 + Psest_3982 0.17 -1.1 4,149,554 + Psest_3982 0.17 -0.3 4,149,554 + Psest_3982 0.17 -1.8 4,149,554 + Psest_3982 0.17 -0.6 4,149,554 + Psest_3982 0.17 -0.1 4,149,555 - Psest_3982 0.17 -0.1 4,149,555 - Psest_3982 0.17 -0.5 4,149,555 - Psest_3982 0.17 +0.9 4,149,555 - Psest_3982 0.17 -0.0 4,149,555 - Psest_3982 0.17 -0.1 4,149,555 - Psest_3982 0.17 -1.4 4,149,555 - Psest_3982 0.17 +0.1 4,149,555 - Psest_3982 0.17 -0.5 4,149,555 - Psest_3982 0.17 +0.1 4,149,555 - Psest_3982 0.17 -1.6 4,149,555 - Psest_3982 0.17 -1.4 4,149,555 - Psest_3982 0.17 -0.4 4,149,555 - Psest_3982 0.17 -1.6 4,149,555 - Psest_3982 0.17 -1.0 4,149,555 - Psest_3982 0.17 -1.2 4,149,555 - Psest_3982 0.17 +0.3 4,149,555 - Psest_3982 0.17 -1.2 4,149,555 - Psest_3982 0.17 +2.5 4,149,614 + Psest_3982 0.21 +1.1 4,149,652 + Psest_3982 0.24 +0.3 4,149,888 + Psest_3982 0.42 -1.1 4,149,889 - Psest_3982 0.42 +0.7 4,149,936 - Psest_3982 0.46 +0.7 4,150,058 + Psest_3982 0.55 +0.4 4,150,058 + Psest_3982 0.55 -0.6 4,150,058 + Psest_3982 0.55 +0.7 4,150,059 - Psest_3982 0.55 -0.1 4,150,059 - Psest_3982 0.55 +1.1 4,150,059 - Psest_3982 0.55 +0.7 4,150,274 + Psest_3982 0.71 -0.2 4,150,274 + Psest_3982 0.71 -0.9 4,150,274 + Psest_3982 0.71 -2.2 4,150,274 + Psest_3982 0.71 -0.7 4,150,275 - Psest_3982 0.72 +1.4 4,150,275 - Psest_3982 0.72 +0.4 4,150,275 - Psest_3982 0.72 +1.9 4,150,292 + Psest_3982 0.73 -0.7 4,150,292 + Psest_3982 0.73 +0.6 4,150,293 - Psest_3982 0.73 +1.6 4,150,293 - Psest_3982 0.73 +0.4 4,150,293 - Psest_3982 0.73 +1.4 4,150,293 - Psest_3982 0.73 +1.8 4,150,293 - Psest_3982 0.73 +0.9
Or see this region's nucleotide sequence