Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3721 and Psest_3722 are separated by 156 nucleotides Psest_3722 and Psest_3723 are separated by 20 nucleotides Psest_3723 and Psest_3724 are separated by 196 nucleotides
Psest_3721: Psest_3721 - Malic enzyme, at 3,890,462 to 3,891,730
_3721
Psest_3722: Psest_3722 - Micrococcal nuclease (thermonuclease) homologs, at 3,891,887 to 3,892,684
_3722
Psest_3723: Psest_3723 - ribosomal protein L31, at 3,892,705 to 3,892,917
_3723
Psest_3724: Psest_3724 - primosomal protein N', at 3,893,114 to 3,895,336
_3724
Position (kb)
3892
3893 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3891.776 kb on + strand at 3891.777 kb on - strand at 3891.777 kb on - strand at 3891.837 kb on + strand at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.055 kb on + strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.056 kb on - strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.057 kb on + strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.058 kb on - strand, within Psest_3722 at 3892.332 kb on + strand, within Psest_3722 at 3892.332 kb on + strand, within Psest_3722 at 3892.333 kb on - strand, within Psest_3722 at 3892.489 kb on + strand, within Psest_3722 at 3892.489 kb on + strand, within Psest_3722 at 3892.665 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.053 kb on + strand at 3893.053 kb on + strand at 3893.053 kb on + strand at 3893.053 kb on + strand at 3893.054 kb on - strand at 3893.054 kb on - strand at 3893.072 kb on + strand at 3893.072 kb on + strand at 3893.082 kb on + strand at 3893.082 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 3,891,776 + -0.6 3,891,777 - -1.0 3,891,777 - -1.6 3,891,837 + +1.1 3,892,055 + Psest_3722 0.21 -1.2 3,892,055 + Psest_3722 0.21 +1.6 3,892,055 + Psest_3722 0.21 -2.5 3,892,055 + Psest_3722 0.21 +0.1 3,892,055 + Psest_3722 0.21 +0.6 3,892,055 + Psest_3722 0.21 +0.3 3,892,055 + Psest_3722 0.21 -0.1 3,892,055 + Psest_3722 0.21 -1.1 3,892,055 + Psest_3722 0.21 +0.7 3,892,055 + Psest_3722 0.21 -0.2 3,892,055 + Psest_3722 0.21 -0.0 3,892,055 + Psest_3722 0.21 -0.7 3,892,055 + Psest_3722 0.21 +0.3 3,892,055 + Psest_3722 0.21 -0.0 3,892,055 + Psest_3722 0.21 -0.5 3,892,055 + Psest_3722 0.21 -1.8 3,892,055 + Psest_3722 0.21 +0.1 3,892,056 - Psest_3722 0.21 +0.4 3,892,056 - Psest_3722 0.21 -0.1 3,892,056 - Psest_3722 0.21 +0.1 3,892,056 - Psest_3722 0.21 -0.1 3,892,056 - Psest_3722 0.21 +0.6 3,892,056 - Psest_3722 0.21 +2.1 3,892,056 - Psest_3722 0.21 +0.6 3,892,056 - Psest_3722 0.21 -0.3 3,892,056 - Psest_3722 0.21 +0.1 3,892,056 - Psest_3722 0.21 -0.0 3,892,056 - Psest_3722 0.21 +0.9 3,892,056 - Psest_3722 0.21 -0.9 3,892,056 - Psest_3722 0.21 -1.5 3,892,056 - Psest_3722 0.21 -1.1 3,892,056 - Psest_3722 0.21 +1.1 3,892,056 - Psest_3722 0.21 -0.8 3,892,056 - Psest_3722 0.21 +0.2 3,892,057 + Psest_3722 0.21 -1.0 3,892,057 + Psest_3722 0.21 +0.3 3,892,057 + Psest_3722 0.21 +0.4 3,892,057 + Psest_3722 0.21 +0.2 3,892,057 + Psest_3722 0.21 -0.2 3,892,057 + Psest_3722 0.21 -0.5 3,892,057 + Psest_3722 0.21 +1.4 3,892,057 + Psest_3722 0.21 +0.1 3,892,057 + Psest_3722 0.21 +0.3 3,892,057 + Psest_3722 0.21 +0.2 3,892,057 + Psest_3722 0.21 -0.2 3,892,057 + Psest_3722 0.21 -0.3 3,892,058 - Psest_3722 0.21 -0.9 3,892,058 - Psest_3722 0.21 -0.7 3,892,058 - Psest_3722 0.21 +0.5 3,892,058 - Psest_3722 0.21 +1.3 3,892,058 - Psest_3722 0.21 -0.4 3,892,058 - Psest_3722 0.21 -0.1 3,892,058 - Psest_3722 0.21 +0.8 3,892,058 - Psest_3722 0.21 +1.1 3,892,058 - Psest_3722 0.21 +0.0 3,892,058 - Psest_3722 0.21 -1.2 3,892,058 - Psest_3722 0.21 -0.5 3,892,058 - Psest_3722 0.21 +1.1 3,892,058 - Psest_3722 0.21 +1.0 3,892,058 - Psest_3722 0.21 -0.2 3,892,058 - Psest_3722 0.21 -0.0 3,892,058 - Psest_3722 0.21 +0.4 3,892,332 + Psest_3722 0.56 +1.0 3,892,332 + Psest_3722 0.56 +0.2 3,892,333 - Psest_3722 0.56 +0.5 3,892,489 + Psest_3722 0.75 +0.1 3,892,489 + Psest_3722 0.75 -0.4 3,892,665 - +0.5 3,892,707 - +2.0 3,892,707 - +2.9 3,892,707 - +2.3 3,892,707 - +2.3 3,892,707 - +2.0 3,893,047 + +0.5 3,893,047 + +0.1 3,893,047 + -0.6 3,893,047 + -0.4 3,893,047 + -1.8 3,893,048 - +1.2 3,893,048 - +0.3 3,893,048 - +0.2 3,893,048 - +0.6 3,893,048 - +1.1 3,893,048 - -0.9 3,893,048 - +1.5 3,893,048 - -0.5 3,893,048 - +0.7 3,893,053 + +1.7 3,893,053 + -0.6 3,893,053 + -0.0 3,893,053 + +0.4 3,893,054 - -1.1 3,893,054 - +0.2 3,893,072 + +1.4 3,893,072 + -0.9 3,893,082 + -0.2 3,893,082 + +0.5
Or see this region's nucleotide sequence