Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3692 and Psest_3693 overlap by 4 nucleotides Psest_3693 and Psest_3694 overlap by 4 nucleotides Psest_3694 and Psest_3695 overlap by 8 nucleotides
Psest_3692: Psest_3692 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 3,855,314 to 3,856,990
_3692
Psest_3693: Psest_3693 - Glycosyltransferases involved in cell wall biogenesis, at 3,856,987 to 3,857,802
_3693
Psest_3694: Psest_3694 - Predicted acyltransferase, at 3,857,799 to 3,858,743
_3694
Psest_3695: Psest_3695 - Histidine ammonia-lyase, at 3,858,736 to 3,860,268
_3695
Position (kb)
3856
3857
3858 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3856.106 kb on + strand, within Psest_3692 at 3856.107 kb on - strand, within Psest_3692 at 3856.107 kb on - strand, within Psest_3692 at 3856.424 kb on + strand, within Psest_3692 at 3856.887 kb on + strand at 3856.888 kb on - strand at 3856.888 kb on - strand at 3856.888 kb on - strand at 3856.888 kb on - strand at 3856.922 kb on + strand at 3856.922 kb on + strand at 3856.922 kb on + strand at 3856.923 kb on - strand at 3856.923 kb on - strand at 3856.931 kb on + strand at 3857.016 kb on - strand at 3857.016 kb on - strand at 3857.098 kb on + strand, within Psest_3693 at 3857.099 kb on - strand, within Psest_3693 at 3857.922 kb on + strand, within Psest_3694 at 3857.923 kb on - strand, within Psest_3694 at 3857.937 kb on + strand, within Psest_3694 at 3857.937 kb on + strand, within Psest_3694 at 3857.938 kb on - strand, within Psest_3694 at 3857.938 kb on - strand, within Psest_3694 at 3857.943 kb on + strand, within Psest_3694 at 3857.943 kb on + strand, within Psest_3694 at 3857.983 kb on - strand, within Psest_3694 at 3857.983 kb on - strand, within Psest_3694 at 3858.247 kb on + strand, within Psest_3694 at 3858.247 kb on + strand, within Psest_3694 at 3858.247 kb on + strand, within Psest_3694 at 3858.248 kb on - strand, within Psest_3694 at 3858.248 kb on - strand, within Psest_3694 at 3858.248 kb on - strand, within Psest_3694 at 3858.248 kb on - strand, within Psest_3694 at 3858.265 kb on + strand, within Psest_3694 at 3858.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 3,856,106 + Psest_3692 0.47 -0.3 3,856,107 - Psest_3692 0.47 +2.1 3,856,107 - Psest_3692 0.47 +1.7 3,856,424 + Psest_3692 0.66 -0.1 3,856,887 + -0.6 3,856,888 - +0.4 3,856,888 - -1.2 3,856,888 - +0.1 3,856,888 - +1.1 3,856,922 + +0.5 3,856,922 + +1.9 3,856,922 + +1.4 3,856,923 - -1.9 3,856,923 - +2.7 3,856,931 + +0.3 3,857,016 - +0.1 3,857,016 - +1.1 3,857,098 + Psest_3693 0.14 +1.2 3,857,099 - Psest_3693 0.14 +1.5 3,857,922 + Psest_3694 0.13 -0.6 3,857,923 - Psest_3694 0.13 -0.5 3,857,937 + Psest_3694 0.15 +0.1 3,857,937 + Psest_3694 0.15 +2.1 3,857,938 - Psest_3694 0.15 +2.4 3,857,938 - Psest_3694 0.15 +1.7 3,857,943 + Psest_3694 0.15 +2.7 3,857,943 + Psest_3694 0.15 +1.4 3,857,983 - Psest_3694 0.19 -1.7 3,857,983 - Psest_3694 0.19 +1.1 3,858,247 + Psest_3694 0.47 +0.4 3,858,247 + Psest_3694 0.47 +1.5 3,858,247 + Psest_3694 0.47 +1.4 3,858,248 - Psest_3694 0.48 +1.7 3,858,248 - Psest_3694 0.48 +1.1 3,858,248 - Psest_3694 0.48 +0.5 3,858,248 - Psest_3694 0.48 +1.6 3,858,265 + Psest_3694 0.49 +1.1 3,858,706 - +0.9
Or see this region's nucleotide sequence