Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3170

Experiment: Def Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Benzalkonium Chloride 0.002 mg/ml
3,340,415	-				+0.4
3,340,496	+		Psest_3167	0.48	-2.3
3,340,496	+		Psest_3167	0.48	+0.0
3,340,497	-		Psest_3167	0.49	+0.7
3,340,497	-		Psest_3167	0.49	+2.6
3,340,508	-		Psest_3167	0.56	+0.3
3,340,508	-		Psest_3167	0.56	-0.8
3,340,528	+		Psest_3167	0.68	-0.8
3,340,529	-		Psest_3167	0.68	+1.9
3,340,529	-		Psest_3167	0.68	+0.8
3,340,563	+		Psest_3167	0.89	-0.1
3,340,563	+		Psest_3167	0.89	-0.8
3,340,563	+		Psest_3167	0.89	-0.7
3,340,563	+		Psest_3167	0.89	+0.7
3,340,563	+		Psest_3167	0.89	-1.6
3,340,563	+		Psest_3167	0.89	-0.6
3,340,563	+		Psest_3167	0.89	+0.1
3,340,563	+		Psest_3167	0.89	+0.3
3,340,563	+		Psest_3167	0.89	-0.4
3,340,563	+		Psest_3167	0.89	+1.2
3,340,563	+		Psest_3167	0.89	-1.0
3,340,564	-				-3.0
3,340,564	-				+0.9
3,340,564	-				-2.2
3,340,564	-				+1.5
3,340,564	-				-0.7
3,340,564	-				-1.7
3,340,564	-				-2.0
3,340,575	+				+0.6
3,340,576	-				-1.4
3,340,576	-				-1.4
3,340,700	+		Psest_3168	0.25	+0.7
3,340,701	-		Psest_3168	0.25	+0.2
3,340,940	+		Psest_3168	0.77	+0.6
3,340,941	-		Psest_3168	0.78	+0.7
3,341,029	+				+1.2
3,341,029	+				+0.5
3,341,030	-				+2.5
3,341,035	+				+1.1
3,341,035	+				+0.8
3,341,035	+				-0.1
3,341,035	+				+1.6
3,341,035	+				-0.2
3,341,035	+				+1.3
3,341,035	+				-0.2
3,341,035	+				+0.8
3,341,035	+				-0.1
3,341,035	+				+1.3
3,341,036	-				-0.3
3,341,036	-				-0.2
3,341,036	-				+0.7
3,341,036	-				-0.2
3,341,036	-				+1.4
3,341,036	-				+1.0
3,341,036	-				+2.2
3,341,036	-				+2.4
3,341,391	+		Psest_3170	0.21	+1.0
3,341,391	+		Psest_3170	0.21	+1.8
3,341,391	+		Psest_3170	0.21	+1.5
3,341,392	-		Psest_3170	0.21	-0.9
3,341,392	-		Psest_3170	0.21	+2.0
3,341,559	+		Psest_3170	0.57	+1.0
3,341,559	+		Psest_3170	0.57	+1.3
3,341,559	+		Psest_3170	0.57	+0.3
3,341,559	+		Psest_3170	0.57	+2.2
3,341,597	+		Psest_3170	0.65	+1.3
3,341,824	+				-0.2
3,341,825	-				+0.0
3,341,831	+				-1.8
3,341,831	+				+0.6
3,341,832	-				+0.6
3,341,862	+				-0.4
3,341,862	+				-0.3
3,341,863	-				+0.3
3,341,920	+				+0.3
3,341,920	+				+0.2
3,341,956	+				+0.9
3,341,961	+				-0.4
3,341,961	+				+0.6
3,341,961	+				-1.3
3,341,961	+				-0.3
3,341,962	-				+0.8
3,341,991	+				+1.2
3,342,141	+		Psest_3171	0.20	-0.6
3,342,141	+		Psest_3171	0.20	-1.0
3,342,141	+		Psest_3171	0.20	+1.2
3,342,141	+		Psest_3171	0.20	+1.0
3,342,141	+		Psest_3171	0.20	-0.6
3,342,141	+		Psest_3171	0.20	-1.0
3,342,141	+		Psest_3171	0.20	+0.0
3,342,141	+		Psest_3171	0.20	+1.9
3,342,142	-		Psest_3171	0.20	+0.5
3,342,142	-		Psest_3171	0.20	+1.6
3,342,142	-		Psest_3171	0.20	-0.2
3,342,142	-		Psest_3171	0.20	+0.8
3,342,142	-		Psest_3171	0.20	+0.4
3,342,142	-		Psest_3171	0.20	+0.3
3,342,183	+		Psest_3171	0.23	+0.8
3,342,183	+		Psest_3171	0.23	+0.5
3,342,183	+		Psest_3171	0.23	-0.4
3,342,183	+		Psest_3171	0.23	-1.4
3,342,183	+		Psest_3171	0.23	-0.2
3,342,183	+		Psest_3171	0.23	+0.4
3,342,183	+		Psest_3171	0.23	-0.2
3,342,183	+		Psest_3171	0.23	-0.3
3,342,183	+		Psest_3171	0.23	+0.2
3,342,183	+		Psest_3171	0.23	-0.3
3,342,183	+		Psest_3171	0.23	-1.4
3,342,183	+		Psest_3171	0.23	-0.6
3,342,183	+		Psest_3171	0.23	+0.6
3,342,183	+		Psest_3171	0.23	-2.4
3,342,184	-		Psest_3171	0.23	+0.3
3,342,184	-		Psest_3171	0.23	-0.3
3,342,184	-		Psest_3171	0.23	-0.5
3,342,184	-		Psest_3171	0.23	+0.0
3,342,184	-		Psest_3171	0.23	+0.2
3,342,184	-		Psest_3171	0.23	+1.7
3,342,184	-		Psest_3171	0.23	+0.2
3,342,356	+		Psest_3171	0.36	+2.4
3,342,730	-		Psest_3171	0.63	+1.0