Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2938 and Psest_2939 overlap by 1 nucleotides Psest_2939 and Psest_2940 are separated by 278 nucleotides Psest_2940 and Psest_2941 are separated by 203 nucleotides
Psest_2938: Psest_2938 - transporter, SSS family, at 3,135,698 to 3,137,353
_2938
Psest_2939: Psest_2939 - Predicted membrane protein, at 3,137,353 to 3,137,667
_2939
Psest_2940: Psest_2940 - Predicted membrane protein, at 3,137,946 to 3,138,170
_2940
Psest_2941: Psest_2941 - hypothetical protein, at 3,138,374 to 3,139,666
_2941
Position (kb)
3137
3138 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3136.411 kb on + strand, within Psest_2938 at 3136.412 kb on - strand, within Psest_2938 at 3136.424 kb on - strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.452 kb on + strand, within Psest_2938 at 3136.452 kb on + strand, within Psest_2938 at 3136.452 kb on + strand, within Psest_2938 at 3136.453 kb on - strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.767 kb on + strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.768 kb on - strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.806 kb on + strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.807 kb on - strand, within Psest_2938 at 3136.809 kb on + strand, within Psest_2938 at 3136.809 kb on + strand, within Psest_2938 at 3136.810 kb on - strand, within Psest_2938 at 3136.870 kb on - strand, within Psest_2938 at 3136.870 kb on - strand, within Psest_2938 at 3137.034 kb on + strand, within Psest_2938 at 3137.034 kb on + strand, within Psest_2938 at 3137.160 kb on + strand, within Psest_2938 at 3137.161 kb on - strand, within Psest_2938 at 3137.161 kb on - strand, within Psest_2938 at 3137.161 kb on - strand, within Psest_2938 at 3137.163 kb on + strand, within Psest_2938 at 3137.163 kb on + strand, within Psest_2938 at 3137.164 kb on - strand, within Psest_2938 at 3137.164 kb on - strand, within Psest_2938 at 3137.164 kb on - strand, within Psest_2938 at 3137.253 kb on + strand at 3137.254 kb on - strand at 3137.254 kb on - strand at 3137.254 kb on - strand at 3137.354 kb on + strand at 3137.354 kb on + strand at 3137.420 kb on + strand, within Psest_2939 at 3137.420 kb on + strand, within Psest_2939 at 3137.420 kb on + strand, within Psest_2939 at 3137.420 kb on + strand, within Psest_2939 at 3137.421 kb on - strand, within Psest_2939 at 3137.421 kb on - strand, within Psest_2939 at 3137.421 kb on - strand, within Psest_2939 at 3137.421 kb on - strand, within Psest_2939 at 3137.421 kb on - strand, within Psest_2939 at 3137.421 kb on - strand, within Psest_2939 at 3137.556 kb on - strand, within Psest_2939 at 3137.556 kb on - strand, within Psest_2939 at 3137.636 kb on + strand at 3137.636 kb on + strand at 3137.636 kb on + strand at 3137.637 kb on - strand at 3137.637 kb on - strand at 3137.637 kb on - strand at 3137.637 kb on - strand at 3137.690 kb on + strand at 3137.720 kb on + strand at 3137.831 kb on + strand at 3137.837 kb on + strand at 3137.837 kb on + strand at 3137.838 kb on - strand at 3138.003 kb on + strand, within Psest_2940 at 3138.003 kb on + strand, within Psest_2940 at 3138.004 kb on - strand, within Psest_2940 at 3138.004 kb on - strand, within Psest_2940 at 3138.078 kb on + strand, within Psest_2940 at 3138.078 kb on + strand, within Psest_2940 at 3138.168 kb on + strand at 3138.168 kb on + strand at 3138.168 kb on + strand at 3138.168 kb on + strand at 3138.168 kb on + strand at 3138.168 kb on + strand at 3138.168 kb on + strand at 3138.169 kb on - strand at 3138.169 kb on - strand at 3138.169 kb on - strand at 3138.169 kb on - strand at 3138.340 kb on + strand at 3138.371 kb on + strand at 3138.371 kb on + strand at 3138.371 kb on + strand at 3138.371 kb on + strand at 3138.371 kb on + strand at 3138.371 kb on + strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.372 kb on - strand at 3138.419 kb on - strand at 3138.441 kb on + strand at 3138.441 kb on + strand at 3138.442 kb on - strand at 3138.442 kb on - strand at 3138.442 kb on - strand at 3138.442 kb on - strand at 3138.442 kb on - strand at 3138.455 kb on + strand at 3138.557 kb on + strand, within Psest_2941
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 3,136,411 + Psest_2938 0.43 -0.7 3,136,412 - Psest_2938 0.43 +0.0 3,136,424 - Psest_2938 0.44 +0.1 3,136,425 + Psest_2938 0.44 -1.7 3,136,425 + Psest_2938 0.44 -0.1 3,136,425 + Psest_2938 0.44 -0.7 3,136,425 + Psest_2938 0.44 +1.7 3,136,425 + Psest_2938 0.44 +0.7 3,136,425 + Psest_2938 0.44 -2.4 3,136,425 + Psest_2938 0.44 +0.1 3,136,425 + Psest_2938 0.44 -0.9 3,136,425 + Psest_2938 0.44 -2.4 3,136,425 + Psest_2938 0.44 -2.1 3,136,426 - Psest_2938 0.44 +0.9 3,136,426 - Psest_2938 0.44 -0.6 3,136,426 - Psest_2938 0.44 -1.2 3,136,426 - Psest_2938 0.44 -0.4 3,136,426 - Psest_2938 0.44 -0.4 3,136,426 - Psest_2938 0.44 -2.9 3,136,426 - Psest_2938 0.44 -1.3 3,136,426 - Psest_2938 0.44 -3.9 3,136,426 - Psest_2938 0.44 -0.3 3,136,426 - Psest_2938 0.44 -2.2 3,136,452 + Psest_2938 0.46 -2.7 3,136,452 + Psest_2938 0.46 +0.3 3,136,452 + Psest_2938 0.46 -1.2 3,136,453 - Psest_2938 0.46 -1.2 3,136,767 + Psest_2938 0.65 -1.4 3,136,767 + Psest_2938 0.65 +0.3 3,136,767 + Psest_2938 0.65 -2.1 3,136,767 + Psest_2938 0.65 +0.1 3,136,767 + Psest_2938 0.65 -0.6 3,136,767 + Psest_2938 0.65 -0.7 3,136,767 + Psest_2938 0.65 -0.8 3,136,767 + Psest_2938 0.65 +0.1 3,136,767 + Psest_2938 0.65 -0.5 3,136,767 + Psest_2938 0.65 -2.9 3,136,767 + Psest_2938 0.65 -2.1 3,136,767 + Psest_2938 0.65 -1.7 3,136,767 + Psest_2938 0.65 -2.1 3,136,767 + Psest_2938 0.65 -2.3 3,136,767 + Psest_2938 0.65 -1.3 3,136,767 + Psest_2938 0.65 +0.3 3,136,767 + Psest_2938 0.65 -1.7 3,136,767 + Psest_2938 0.65 -2.3 3,136,767 + Psest_2938 0.65 -0.9 3,136,768 - Psest_2938 0.65 -0.1 3,136,768 - Psest_2938 0.65 -1.5 3,136,768 - Psest_2938 0.65 -1.9 3,136,768 - Psest_2938 0.65 -1.9 3,136,768 - Psest_2938 0.65 -0.1 3,136,768 - Psest_2938 0.65 +0.6 3,136,768 - Psest_2938 0.65 -2.9 3,136,768 - Psest_2938 0.65 +0.7 3,136,768 - Psest_2938 0.65 +0.1 3,136,806 + Psest_2938 0.67 -1.7 3,136,806 + Psest_2938 0.67 -1.5 3,136,806 + Psest_2938 0.67 +0.2 3,136,806 + Psest_2938 0.67 +0.3 3,136,806 + Psest_2938 0.67 -2.4 3,136,806 + Psest_2938 0.67 -1.9 3,136,806 + Psest_2938 0.67 -0.9 3,136,806 + Psest_2938 0.67 -1.1 3,136,806 + Psest_2938 0.67 -1.1 3,136,806 + Psest_2938 0.67 -1.5 3,136,807 - Psest_2938 0.67 +0.5 3,136,807 - Psest_2938 0.67 -0.6 3,136,807 - Psest_2938 0.67 -0.7 3,136,807 - Psest_2938 0.67 +0.5 3,136,807 - Psest_2938 0.67 -2.4 3,136,807 - Psest_2938 0.67 +2.1 3,136,807 - Psest_2938 0.67 +1.0 3,136,807 - Psest_2938 0.67 +0.3 3,136,809 + Psest_2938 0.67 -1.4 3,136,809 + Psest_2938 0.67 -2.4 3,136,810 - Psest_2938 0.67 +1.1 3,136,870 - Psest_2938 0.71 -1.2 3,136,870 - Psest_2938 0.71 -0.0 3,137,034 + Psest_2938 0.81 -0.3 3,137,034 + Psest_2938 0.81 -1.1 3,137,160 + Psest_2938 0.88 -1.2 3,137,161 - Psest_2938 0.88 -0.9 3,137,161 - Psest_2938 0.88 -1.9 3,137,161 - Psest_2938 0.88 +0.1 3,137,163 + Psest_2938 0.88 -2.4 3,137,163 + Psest_2938 0.88 -1.3 3,137,164 - Psest_2938 0.89 -0.9 3,137,164 - Psest_2938 0.89 -2.8 3,137,164 - Psest_2938 0.89 -1.4 3,137,253 + -0.5 3,137,254 - -1.2 3,137,254 - -1.1 3,137,254 - -0.9 3,137,354 + -1.5 3,137,354 + -1.7 3,137,420 + Psest_2939 0.21 -1.3 3,137,420 + Psest_2939 0.21 -1.2 3,137,420 + Psest_2939 0.21 -2.2 3,137,420 + Psest_2939 0.21 -0.9 3,137,421 - Psest_2939 0.22 +0.1 3,137,421 - Psest_2939 0.22 -0.8 3,137,421 - Psest_2939 0.22 +0.1 3,137,421 - Psest_2939 0.22 -1.8 3,137,421 - Psest_2939 0.22 -0.6 3,137,421 - Psest_2939 0.22 -0.5 3,137,556 - Psest_2939 0.64 -1.5 3,137,556 - Psest_2939 0.64 -1.1 3,137,636 + +0.5 3,137,636 + -2.9 3,137,636 + -0.5 3,137,637 - +0.1 3,137,637 - -1.2 3,137,637 - +0.1 3,137,637 - -0.9 3,137,690 + +0.2 3,137,720 + -1.8 3,137,831 + -0.6 3,137,837 + -1.2 3,137,837 + +1.7 3,137,838 - -0.5 3,138,003 + Psest_2940 0.25 -1.2 3,138,003 + Psest_2940 0.25 -0.3 3,138,004 - Psest_2940 0.26 +0.4 3,138,004 - Psest_2940 0.26 -0.2 3,138,078 + Psest_2940 0.59 -1.8 3,138,078 + Psest_2940 0.59 +1.8 3,138,168 + -1.8 3,138,168 + +1.2 3,138,168 + +0.4 3,138,168 + +1.5 3,138,168 + +1.2 3,138,168 + +0.3 3,138,168 + +1.2 3,138,169 - +0.0 3,138,169 - -0.8 3,138,169 - -0.8 3,138,169 - +0.2 3,138,340 + +1.0 3,138,371 + +0.4 3,138,371 + +0.9 3,138,371 + -1.0 3,138,371 + -0.1 3,138,371 + +0.7 3,138,371 + +1.8 3,138,372 - -0.2 3,138,372 - +1.2 3,138,372 - +0.6 3,138,372 - +0.6 3,138,372 - +0.0 3,138,372 - +0.1 3,138,372 - +1.6 3,138,372 - +0.6 3,138,372 - +0.6 3,138,372 - +0.9 3,138,372 - +1.2 3,138,372 - +1.3 3,138,419 - +1.8 3,138,441 + -2.1 3,138,441 + -0.7 3,138,442 - +0.5 3,138,442 - +1.2 3,138,442 - +1.0 3,138,442 - +0.9 3,138,442 - +0.7 3,138,455 + +1.0 3,138,557 + Psest_2941 0.14 +0.1
Or see this region's nucleotide sequence