Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2889 and Psest_2890 are separated by 253 nucleotides Psest_2890 and Psest_2891 are separated by 225 nucleotides
Psest_2889: Psest_2889 - Predicted flavoprotein involved in K+ transport, at 3,082,346 to 3,084,226
_2889
Psest_2890: Psest_2890 - diguanylate cyclase (GGDEF) domain, at 3,084,480 to 3,086,030
_2890
Psest_2891: Psest_2891 - TonB-dependent siderophore receptor, at 3,086,256 to 3,088,409
_2891
Position (kb)
3084
3085
3086
3087 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3083.558 kb on + strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.628 kb on - strand, within Psest_2889 at 3083.693 kb on + strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.784 kb on - strand, within Psest_2889 at 3083.786 kb on + strand, within Psest_2889 at 3083.786 kb on + strand, within Psest_2889 at 3083.786 kb on + strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.887 kb on - strand, within Psest_2889 at 3084.134 kb on + strand at 3084.134 kb on + strand at 3084.134 kb on + strand at 3084.143 kb on + strand at 3084.143 kb on + strand at 3084.143 kb on + strand at 3084.143 kb on + strand at 3084.144 kb on - strand at 3084.185 kb on - strand at 3084.194 kb on + strand at 3084.194 kb on + strand at 3084.194 kb on + strand at 3084.195 kb on - strand at 3084.195 kb on - strand at 3084.388 kb on + strand at 3084.496 kb on + strand at 3084.497 kb on - strand at 3084.567 kb on + strand at 3084.621 kb on + strand at 3084.622 kb on - strand at 3084.913 kb on - strand, within Psest_2890 at 3084.933 kb on + strand, within Psest_2890 at 3084.933 kb on + strand, within Psest_2890 at 3084.934 kb on - strand, within Psest_2890 at 3084.934 kb on - strand, within Psest_2890 at 3084.979 kb on - strand, within Psest_2890 at 3084.990 kb on - strand, within Psest_2890 at 3085.050 kb on + strand, within Psest_2890 at 3085.051 kb on - strand, within Psest_2890 at 3085.051 kb on - strand, within Psest_2890 at 3085.051 kb on - strand, within Psest_2890 at 3085.068 kb on + strand, within Psest_2890 at 3085.069 kb on - strand, within Psest_2890 at 3085.069 kb on - strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.138 kb on + strand, within Psest_2890 at 3085.203 kb on - strand, within Psest_2890 at 3085.203 kb on - strand, within Psest_2890 at 3085.660 kb on + strand, within Psest_2890 at 3085.661 kb on - strand, within Psest_2890 at 3085.936 kb on - strand at 3085.980 kb on + strand at 3086.947 kb on - strand, within Psest_2891 at 3086.947 kb on - strand, within Psest_2891 at 3086.947 kb on - strand, within Psest_2891 at 3087.012 kb on + strand, within Psest_2891 at 3087.012 kb on + strand, within Psest_2891 at 3087.013 kb on - strand, within Psest_2891 at 3087.013 kb on - strand, within Psest_2891
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 3,083,558 + Psest_2889 0.64 +0.5 3,083,558 + Psest_2889 0.64 +0.3 3,083,558 + Psest_2889 0.64 -0.5 3,083,558 + Psest_2889 0.64 -0.4 3,083,628 - Psest_2889 0.68 -1.3 3,083,693 + Psest_2889 0.72 +1.4 3,083,694 - Psest_2889 0.72 -0.2 3,083,694 - Psest_2889 0.72 +0.1 3,083,694 - Psest_2889 0.72 -1.0 3,083,694 - Psest_2889 0.72 -1.9 3,083,694 - Psest_2889 0.72 -0.2 3,083,694 - Psest_2889 0.72 -0.2 3,083,694 - Psest_2889 0.72 +0.2 3,083,694 - Psest_2889 0.72 -0.1 3,083,762 + Psest_2889 0.75 -0.7 3,083,762 + Psest_2889 0.75 +1.4 3,083,762 + Psest_2889 0.75 -0.1 3,083,762 + Psest_2889 0.75 +0.7 3,083,762 + Psest_2889 0.75 -0.0 3,083,762 + Psest_2889 0.75 +0.9 3,083,762 + Psest_2889 0.75 +0.6 3,083,762 + Psest_2889 0.75 +0.7 3,083,762 + Psest_2889 0.75 +0.1 3,083,762 + Psest_2889 0.75 +1.1 3,083,762 + Psest_2889 0.75 +0.1 3,083,762 + Psest_2889 0.75 -2.2 3,083,762 + Psest_2889 0.75 -0.1 3,083,762 + Psest_2889 0.75 -1.7 3,083,762 + Psest_2889 0.75 +1.1 3,083,762 + Psest_2889 0.75 +2.9 3,083,762 + Psest_2889 0.75 +0.1 3,083,763 - Psest_2889 0.75 -0.2 3,083,763 - Psest_2889 0.75 -0.2 3,083,763 - Psest_2889 0.75 +0.2 3,083,763 - Psest_2889 0.75 +0.8 3,083,763 - Psest_2889 0.75 -0.2 3,083,763 - Psest_2889 0.75 -1.2 3,083,763 - Psest_2889 0.75 -1.1 3,083,763 - Psest_2889 0.75 -0.5 3,083,784 - Psest_2889 0.76 -0.4 3,083,786 + Psest_2889 0.77 +0.6 3,083,786 + Psest_2889 0.77 +0.5 3,083,786 + Psest_2889 0.77 +0.2 3,083,787 - Psest_2889 0.77 -1.3 3,083,787 - Psest_2889 0.77 +1.1 3,083,787 - Psest_2889 0.77 -0.1 3,083,787 - Psest_2889 0.77 -0.8 3,083,787 - Psest_2889 0.77 -1.6 3,083,787 - Psest_2889 0.77 -0.3 3,083,787 - Psest_2889 0.77 -0.1 3,083,787 - Psest_2889 0.77 +1.9 3,083,787 - Psest_2889 0.77 -0.2 3,083,787 - Psest_2889 0.77 -1.7 3,083,887 - Psest_2889 0.82 -2.1 3,084,134 + +1.7 3,084,134 + +0.4 3,084,134 + -0.5 3,084,143 + +0.5 3,084,143 + -0.5 3,084,143 + +2.2 3,084,143 + +0.9 3,084,144 - -1.1 3,084,185 - -1.1 3,084,194 + +1.0 3,084,194 + +2.1 3,084,194 + +0.0 3,084,195 - -0.2 3,084,195 - -2.0 3,084,388 + -2.1 3,084,496 + -0.7 3,084,497 - -0.8 3,084,567 + -0.3 3,084,621 + +1.2 3,084,622 - -1.2 3,084,913 - Psest_2890 0.28 +0.5 3,084,933 + Psest_2890 0.29 -0.3 3,084,933 + Psest_2890 0.29 -0.2 3,084,934 - Psest_2890 0.29 -0.0 3,084,934 - Psest_2890 0.29 +0.5 3,084,979 - Psest_2890 0.32 +0.3 3,084,990 - Psest_2890 0.33 +0.1 3,085,050 + Psest_2890 0.37 +0.2 3,085,051 - Psest_2890 0.37 -0.9 3,085,051 - Psest_2890 0.37 -0.9 3,085,051 - Psest_2890 0.37 +0.5 3,085,068 + Psest_2890 0.38 +0.1 3,085,069 - Psest_2890 0.38 -1.2 3,085,069 - Psest_2890 0.38 -1.2 3,085,074 + Psest_2890 0.38 +0.3 3,085,074 + Psest_2890 0.38 -0.5 3,085,074 + Psest_2890 0.38 -1.3 3,085,074 + Psest_2890 0.38 +1.8 3,085,074 + Psest_2890 0.38 -0.1 3,085,074 + Psest_2890 0.38 +0.9 3,085,074 + Psest_2890 0.38 -0.3 3,085,074 + Psest_2890 0.38 +1.4 3,085,074 + Psest_2890 0.38 -0.7 3,085,075 - Psest_2890 0.38 -0.0 3,085,075 - Psest_2890 0.38 -0.8 3,085,075 - Psest_2890 0.38 +0.1 3,085,075 - Psest_2890 0.38 +1.1 3,085,075 - Psest_2890 0.38 -1.1 3,085,075 - Psest_2890 0.38 -0.2 3,085,075 - Psest_2890 0.38 -1.3 3,085,138 + Psest_2890 0.42 -2.9 3,085,203 - Psest_2890 0.47 -2.2 3,085,203 - Psest_2890 0.47 -0.2 3,085,660 + Psest_2890 0.76 -1.3 3,085,661 - Psest_2890 0.76 -1.2 3,085,936 - -1.0 3,085,980 + -0.2 3,086,947 - Psest_2891 0.32 -0.5 3,086,947 - Psest_2891 0.32 -1.2 3,086,947 - Psest_2891 0.32 +0.9 3,087,012 + Psest_2891 0.35 +0.4 3,087,012 + Psest_2891 0.35 -0.7 3,087,013 - Psest_2891 0.35 -0.0 3,087,013 - Psest_2891 0.35 -0.0
Or see this region's nucleotide sequence