Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2714 and Psest_2715 are separated by 93 nucleotides Psest_2715 and Psest_2716 overlap by 4 nucleotides Psest_2716 and Psest_2717 are separated by 85 nucleotides
Psest_2714: Psest_2714 - 7-cyano-7-deazaguanine reductase, at 2,903,667 to 2,904,497
_2714
Psest_2715: Psest_2715 - ABC-type polysaccharide/polyol phosphate export systems, permease component, at 2,904,591 to 2,905,370
_2715
Psest_2716: Psest_2716 - ABC-type multidrug transport system, ATPase component, at 2,905,367 to 2,906,296
_2716
Psest_2717: Psest_2717 - Succinylglutamate desuccinylase, at 2,906,382 to 2,907,380
_2717
Position (kb)
2905
2906
2907 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2904.440 kb on - strand at 2904.440 kb on - strand at 2904.640 kb on + strand at 2904.640 kb on + strand at 2904.687 kb on - strand, within Psest_2715 at 2904.797 kb on - strand, within Psest_2715 at 2904.797 kb on - strand, within Psest_2715 at 2904.797 kb on - strand, within Psest_2715 at 2904.797 kb on - strand, within Psest_2715 at 2905.088 kb on + strand, within Psest_2715 at 2905.180 kb on + strand, within Psest_2715 at 2905.180 kb on + strand, within Psest_2715 at 2905.180 kb on + strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.181 kb on - strand, within Psest_2715 at 2905.189 kb on + strand, within Psest_2715 at 2905.190 kb on - strand, within Psest_2715 at 2905.190 kb on - strand, within Psest_2715 at 2905.250 kb on - strand, within Psest_2715 at 2905.250 kb on - strand, within Psest_2715 at 2905.250 kb on - strand, within Psest_2715 at 2905.250 kb on - strand, within Psest_2715 at 2905.304 kb on - strand at 2905.509 kb on - strand, within Psest_2716 at 2905.555 kb on + strand, within Psest_2716 at 2905.556 kb on - strand, within Psest_2716 at 2906.256 kb on + strand at 2906.256 kb on + strand at 2906.256 kb on + strand at 2906.256 kb on + strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.291 kb on - strand at 2906.296 kb on + strand at 2906.330 kb on + strand at 2906.330 kb on + strand at 2906.330 kb on + strand at 2906.331 kb on - strand at 2906.331 kb on - strand at 2906.335 kb on - strand at 2906.420 kb on + strand at 2906.421 kb on - strand at 2906.421 kb on - strand at 2906.938 kb on + strand, within Psest_2717 at 2906.939 kb on - strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 2,904,440 - +0.2 2,904,440 - -0.8 2,904,640 + -0.1 2,904,640 + -0.9 2,904,687 - Psest_2715 0.12 +2.0 2,904,797 - Psest_2715 0.26 +0.4 2,904,797 - Psest_2715 0.26 +1.9 2,904,797 - Psest_2715 0.26 +0.1 2,904,797 - Psest_2715 0.26 +0.5 2,905,088 + Psest_2715 0.64 -1.6 2,905,180 + Psest_2715 0.76 +1.7 2,905,180 + Psest_2715 0.76 +0.6 2,905,180 + Psest_2715 0.76 -0.3 2,905,181 - Psest_2715 0.76 -1.2 2,905,181 - Psest_2715 0.76 +0.7 2,905,181 - Psest_2715 0.76 -0.8 2,905,181 - Psest_2715 0.76 +1.2 2,905,181 - Psest_2715 0.76 +0.3 2,905,181 - Psest_2715 0.76 +0.1 2,905,181 - Psest_2715 0.76 -1.5 2,905,189 + Psest_2715 0.77 -1.8 2,905,190 - Psest_2715 0.77 +2.1 2,905,190 - Psest_2715 0.77 +2.7 2,905,250 - Psest_2715 0.84 +0.9 2,905,250 - Psest_2715 0.84 -0.4 2,905,250 - Psest_2715 0.84 +0.1 2,905,250 - Psest_2715 0.84 +1.8 2,905,304 - +0.3 2,905,509 - Psest_2716 0.15 +0.9 2,905,555 + Psest_2716 0.20 +0.7 2,905,556 - Psest_2716 0.20 +1.1 2,906,256 + +0.5 2,906,256 + -0.4 2,906,256 + +0.7 2,906,256 + -0.9 2,906,257 - -1.6 2,906,257 - +0.4 2,906,257 - -2.5 2,906,257 - -0.8 2,906,257 - +0.4 2,906,257 - -0.2 2,906,291 - +1.6 2,906,296 + +0.3 2,906,330 + -2.2 2,906,330 + +0.7 2,906,330 + -0.0 2,906,331 - +0.9 2,906,331 - -0.2 2,906,335 - -3.0 2,906,420 + +0.4 2,906,421 - -0.8 2,906,421 - -1.2 2,906,938 + Psest_2717 0.56 +0.5 2,906,939 - Psest_2717 0.56 -1.9 2,907,024 + Psest_2717 0.64 +0.7 2,907,024 + Psest_2717 0.64 -1.8 2,907,024 + Psest_2717 0.64 +1.2 2,907,025 - Psest_2717 0.64 +0.3 2,907,025 - Psest_2717 0.64 +1.8 2,907,025 - Psest_2717 0.64 +1.5 2,907,183 + Psest_2717 0.80 +0.9 2,907,183 + Psest_2717 0.80 +1.2 2,907,183 + Psest_2717 0.80 +0.5 2,907,183 + Psest_2717 0.80 +1.3 2,907,183 + Psest_2717 0.80 -0.6 2,907,183 + Psest_2717 0.80 -0.1 2,907,183 + Psest_2717 0.80 +0.2 2,907,183 + Psest_2717 0.80 +0.3 2,907,183 + Psest_2717 0.80 -0.0 2,907,184 - Psest_2717 0.80 +0.7 2,907,184 - Psest_2717 0.80 +2.0 2,907,184 - Psest_2717 0.80 +0.6 2,907,184 - Psest_2717 0.80 +2.0 2,907,184 - Psest_2717 0.80 +0.3 2,907,184 - Psest_2717 0.80 -0.1 2,907,184 - Psest_2717 0.80 +1.5 2,907,184 - Psest_2717 0.80 +0.5
Or see this region's nucleotide sequence