Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2661 and Psest_2662 are separated by 227 nucleotides Psest_2662 and Psest_2663 are separated by 366 nucleotides
Psest_2661: Psest_2661 - Isopropylmalate/homocitrate/citramalate synthases, at 2,848,044 to 2,848,979
_2661
Psest_2662: Psest_2662 - hypothetical protein, at 2,849,207 to 2,850,085
_2662
Psest_2663: Psest_2663 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,850,452 to 2,851,342
_2663
Position (kb)
2849
2850
2851 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2848.266 kb on + strand, within Psest_2661 at 2848.267 kb on - strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.420 kb on + strand, within Psest_2661 at 2848.421 kb on - strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.515 kb on + strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.516 kb on - strand, within Psest_2661 at 2848.784 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.808 kb on + strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2848.809 kb on - strand, within Psest_2661 at 2849.209 kb on - strand at 2849.210 kb on + strand at 2849.211 kb on - strand at 2849.261 kb on + strand at 2849.272 kb on - strand at 2849.315 kb on - strand, within Psest_2662 at 2849.315 kb on - strand, within Psest_2662 at 2849.357 kb on + strand, within Psest_2662 at 2849.357 kb on + strand, within Psest_2662 at 2849.364 kb on - strand, within Psest_2662 at 2849.378 kb on + strand, within Psest_2662 at 2849.585 kb on + strand, within Psest_2662 at 2849.616 kb on - strand, within Psest_2662 at 2849.646 kb on - strand, within Psest_2662 at 2849.655 kb on - strand, within Psest_2662 at 2849.670 kb on - strand, within Psest_2662 at 2849.720 kb on - strand, within Psest_2662 at 2849.740 kb on + strand, within Psest_2662 at 2849.741 kb on - strand, within Psest_2662 at 2849.768 kb on + strand, within Psest_2662 at 2849.816 kb on + strand, within Psest_2662 at 2849.877 kb on + strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2849.878 kb on - strand, within Psest_2662 at 2850.106 kb on + strand at 2850.106 kb on + strand at 2850.106 kb on + strand at 2850.107 kb on - strand at 2850.108 kb on + strand at 2850.112 kb on + strand at 2850.113 kb on - strand at 2850.128 kb on + strand at 2850.129 kb on - strand at 2850.129 kb on - strand at 2850.130 kb on + strand at 2850.131 kb on - strand at 2850.131 kb on - strand at 2850.131 kb on - strand at 2850.131 kb on - strand at 2850.131 kb on - strand at 2850.131 kb on - strand at 2850.153 kb on + strand at 2850.153 kb on + strand at 2850.153 kb on + strand at 2850.153 kb on + strand at 2850.153 kb on + strand at 2850.153 kb on + strand at 2850.154 kb on - strand at 2850.154 kb on - strand at 2850.154 kb on - strand at 2850.154 kb on - strand at 2850.155 kb on + strand at 2850.155 kb on + strand at 2850.156 kb on - strand at 2850.217 kb on + strand at 2850.219 kb on + strand at 2850.241 kb on + strand at 2850.242 kb on - strand at 2850.242 kb on - strand at 2850.242 kb on - strand at 2850.242 kb on - strand at 2850.374 kb on - strand at 2850.441 kb on + strand at 2850.441 kb on + strand at 2850.441 kb on + strand at 2850.441 kb on + strand at 2850.441 kb on + strand at 2850.441 kb on + strand at 2850.441 kb on + strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.442 kb on - strand at 2850.681 kb on + strand, within Psest_2663 at 2850.682 kb on - strand, within Psest_2663 at 2850.682 kb on - strand, within Psest_2663 at 2850.682 kb on - strand, within Psest_2663 at 2850.796 kb on - strand, within Psest_2663 at 2850.888 kb on + strand, within Psest_2663 at 2850.888 kb on + strand, within Psest_2663 at 2850.888 kb on + strand, within Psest_2663 at 2850.888 kb on + strand, within Psest_2663 at 2850.888 kb on + strand, within Psest_2663 at 2850.888 kb on + strand, within Psest_2663 at 2850.889 kb on - strand, within Psest_2663 at 2850.889 kb on - strand, within Psest_2663 at 2850.889 kb on - strand, within Psest_2663 at 2850.889 kb on - strand, within Psest_2663 at 2850.903 kb on + strand, within Psest_2663 at 2850.903 kb on + strand, within Psest_2663 at 2850.904 kb on - strand, within Psest_2663 at 2850.904 kb on - strand, within Psest_2663 at 2850.904 kb on - strand, within Psest_2663 at 2850.908 kb on - strand, within Psest_2663 at 2850.908 kb on - strand, within Psest_2663
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 2,848,266 + Psest_2661 0.24 +0.1 2,848,267 - Psest_2661 0.24 +0.3 2,848,420 + Psest_2661 0.40 -0.1 2,848,420 + Psest_2661 0.40 -1.0 2,848,420 + Psest_2661 0.40 -2.0 2,848,420 + Psest_2661 0.40 -0.7 2,848,420 + Psest_2661 0.40 -2.2 2,848,421 - Psest_2661 0.40 +0.8 2,848,515 + Psest_2661 0.50 -2.2 2,848,515 + Psest_2661 0.50 -0.9 2,848,515 + Psest_2661 0.50 -0.1 2,848,515 + Psest_2661 0.50 +0.4 2,848,515 + Psest_2661 0.50 -1.4 2,848,515 + Psest_2661 0.50 -2.6 2,848,515 + Psest_2661 0.50 -1.6 2,848,515 + Psest_2661 0.50 -1.3 2,848,516 - Psest_2661 0.50 -1.2 2,848,516 - Psest_2661 0.50 +0.1 2,848,516 - Psest_2661 0.50 -0.8 2,848,516 - Psest_2661 0.50 -1.8 2,848,516 - Psest_2661 0.50 +0.7 2,848,516 - Psest_2661 0.50 +0.5 2,848,516 - Psest_2661 0.50 -1.6 2,848,516 - Psest_2661 0.50 -0.9 2,848,516 - Psest_2661 0.50 -0.4 2,848,516 - Psest_2661 0.50 -0.1 2,848,784 + Psest_2661 0.79 -1.2 2,848,808 + Psest_2661 0.82 +1.7 2,848,808 + Psest_2661 0.82 -2.3 2,848,808 + Psest_2661 0.82 -2.2 2,848,808 + Psest_2661 0.82 -1.2 2,848,808 + Psest_2661 0.82 -0.0 2,848,808 + Psest_2661 0.82 -2.9 2,848,808 + Psest_2661 0.82 +0.5 2,848,808 + Psest_2661 0.82 -1.2 2,848,808 + Psest_2661 0.82 -0.8 2,848,808 + Psest_2661 0.82 -1.5 2,848,808 + Psest_2661 0.82 +0.1 2,848,808 + Psest_2661 0.82 -0.3 2,848,808 + Psest_2661 0.82 -0.6 2,848,809 - Psest_2661 0.82 -0.0 2,848,809 - Psest_2661 0.82 +1.1 2,848,809 - Psest_2661 0.82 -0.3 2,848,809 - Psest_2661 0.82 -1.7 2,848,809 - Psest_2661 0.82 -0.9 2,848,809 - Psest_2661 0.82 -0.5 2,848,809 - Psest_2661 0.82 +0.5 2,848,809 - Psest_2661 0.82 -0.1 2,848,809 - Psest_2661 0.82 +1.1 2,848,809 - Psest_2661 0.82 +0.3 2,848,809 - Psest_2661 0.82 -0.7 2,848,809 - Psest_2661 0.82 -0.5 2,848,809 - Psest_2661 0.82 -1.5 2,848,809 - Psest_2661 0.82 -0.0 2,849,209 - -0.4 2,849,210 + -1.5 2,849,211 - +1.7 2,849,261 + -1.9 2,849,272 - -1.1 2,849,315 - Psest_2662 0.12 -2.3 2,849,315 - Psest_2662 0.12 -2.7 2,849,357 + Psest_2662 0.17 -0.7 2,849,357 + Psest_2662 0.17 -2.4 2,849,364 - Psest_2662 0.18 -0.9 2,849,378 + Psest_2662 0.19 -0.5 2,849,585 + Psest_2662 0.43 +0.1 2,849,616 - Psest_2662 0.47 +0.3 2,849,646 - Psest_2662 0.50 -0.0 2,849,655 - Psest_2662 0.51 -1.0 2,849,670 - Psest_2662 0.53 -0.6 2,849,720 - Psest_2662 0.58 -1.4 2,849,740 + Psest_2662 0.61 -0.7 2,849,741 - Psest_2662 0.61 -1.0 2,849,768 + Psest_2662 0.64 +0.4 2,849,816 + Psest_2662 0.69 +0.1 2,849,877 + Psest_2662 0.76 -1.3 2,849,878 - Psest_2662 0.76 -1.2 2,849,878 - Psest_2662 0.76 +0.5 2,849,878 - Psest_2662 0.76 -1.3 2,850,106 + -1.5 2,850,106 + -2.2 2,850,106 + -1.4 2,850,107 - -1.8 2,850,108 + -0.3 2,850,112 + -1.9 2,850,113 - -0.9 2,850,128 + -1.3 2,850,129 - -1.3 2,850,129 - +0.1 2,850,130 + -2.1 2,850,131 - -0.9 2,850,131 - +0.7 2,850,131 - -0.2 2,850,131 - -1.2 2,850,131 - -2.1 2,850,131 - -0.5 2,850,153 + -1.7 2,850,153 + -1.4 2,850,153 + -1.2 2,850,153 + -1.9 2,850,153 + -2.7 2,850,153 + -0.5 2,850,154 - +0.2 2,850,154 - -1.5 2,850,154 - +1.1 2,850,154 - -1.2 2,850,155 + +0.5 2,850,155 + -1.2 2,850,156 - -0.6 2,850,217 + -1.9 2,850,219 + -2.5 2,850,241 + -0.7 2,850,242 - -1.4 2,850,242 - -0.6 2,850,242 - +0.6 2,850,242 - +0.3 2,850,374 - -0.2 2,850,441 + -0.0 2,850,441 + +0.2 2,850,441 + -2.1 2,850,441 + -0.6 2,850,441 + -0.7 2,850,441 + -1.2 2,850,441 + +0.3 2,850,442 - +1.1 2,850,442 - -0.3 2,850,442 - -0.5 2,850,442 - -1.2 2,850,442 - +0.3 2,850,442 - -0.3 2,850,442 - -0.4 2,850,442 - -0.6 2,850,442 - -2.1 2,850,442 - -0.7 2,850,442 - +1.1 2,850,442 - -0.1 2,850,442 - -0.1 2,850,442 - +0.8 2,850,681 + Psest_2663 0.26 +0.3 2,850,682 - Psest_2663 0.26 -0.9 2,850,682 - Psest_2663 0.26 +0.4 2,850,682 - Psest_2663 0.26 -1.2 2,850,796 - Psest_2663 0.39 -0.3 2,850,888 + Psest_2663 0.49 -0.7 2,850,888 + Psest_2663 0.49 -0.9 2,850,888 + Psest_2663 0.49 -0.3 2,850,888 + Psest_2663 0.49 +0.3 2,850,888 + Psest_2663 0.49 -0.5 2,850,888 + Psest_2663 0.49 -0.9 2,850,889 - Psest_2663 0.49 +0.6 2,850,889 - Psest_2663 0.49 -0.5 2,850,889 - Psest_2663 0.49 +0.1 2,850,889 - Psest_2663 0.49 +0.1 2,850,903 + Psest_2663 0.51 +0.1 2,850,903 + Psest_2663 0.51 -0.7 2,850,904 - Psest_2663 0.51 -0.8 2,850,904 - Psest_2663 0.51 -0.9 2,850,904 - Psest_2663 0.51 -0.4 2,850,908 - Psest_2663 0.51 -1.8 2,850,908 - Psest_2663 0.51 +0.6
Or see this region's nucleotide sequence