Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2645

Experiment: Def Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Benzalkonium Chloride 0.002 mg/ml
2,827,575	+				+1.1
2,827,575	+				-0.5
2,827,575	+				-0.5
2,827,575	+				-0.5
2,827,575	+				-0.5
2,827,575	+				-2.2
2,827,575	+				-0.5
2,827,576	-				-1.7
2,827,576	-				-1.2
2,827,576	-				-1.3
2,827,576	-				-1.2
2,827,576	-				-0.0
2,827,576	-				+0.5
2,827,576	-				-0.3
2,827,576	-				-0.4
2,827,576	-				-3.1
2,827,576	-				-1.9
2,827,576	-				-1.9
2,827,576	-				-1.0
2,827,576	-				+0.1
2,827,576	-				+0.4
2,827,576	-				-2.3
2,827,576	-				+0.9
2,827,579	+				+3.5
2,827,579	+				+1.1
2,827,579	+				+0.1
2,827,579	+				-1.5
2,827,579	+				-0.9
2,827,580	-				-2.7
2,827,580	-				-1.1
2,827,580	-				-0.3
2,827,580	-				-0.9
2,827,580	-				-2.7
2,827,580	-				-0.9
2,828,454	+		Psest_2645	0.42	-1.2
2,828,455	-		Psest_2645	0.43	-1.8
2,828,455	-		Psest_2645	0.43	-3.0
2,828,455	-		Psest_2645	0.43	-1.2
2,828,455	-		Psest_2645	0.43	-1.5
2,828,464	+		Psest_2645	0.44	-3.5
2,828,464	+		Psest_2645	0.44	-1.5
2,828,465	-		Psest_2645	0.44	-4.4
2,828,465	-		Psest_2645	0.44	-1.5
2,828,465	-		Psest_2645	0.44	-3.3
2,828,480	-		Psest_2645	0.46	-2.9
2,828,623	+		Psest_2645	0.66	-2.6
2,828,624	-		Psest_2645	0.66	-1.5
2,828,732	-		Psest_2645	0.82	-2.5
2,828,732	-		Psest_2645	0.82	-1.7
2,828,897	-				+0.1
2,829,030	+				+0.1
2,829,031	-				-0.6
2,829,031	-				+0.8
2,829,031	-				+0.4
2,829,032	+				-0.9
2,829,032	+				-2.7
2,829,033	-				-0.3
2,829,033	-				+0.5
2,829,034	+				-3.7
2,829,035	-				+0.5
2,829,035	-				-0.6
2,829,035	-				-1.9
2,829,051	+				-1.1
2,829,270	+		Psest_2646	0.33	-0.9
2,829,270	+		Psest_2646	0.33	-0.9
2,829,270	+		Psest_2646	0.33	-2.0
2,829,644	+				+0.1
2,829,644	+				-0.5
2,829,645	-				-1.5
2,829,689	+				-1.1
2,829,689	+				-0.6
2,829,689	+				-2.6
2,829,810	+		Psest_2647	0.25	-1.6
2,829,811	-		Psest_2647	0.25	-0.1