Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2552 and Psest_2553 are separated by 198 nucleotides Psest_2553 and Psest_2554 are separated by 38 nucleotides
Psest_2552: Psest_2552 - hypothetical protein, at 2,732,450 to 2,733,805
_2552
Psest_2553: Psest_2553 - SnoaL-like polyketide cyclase., at 2,734,004 to 2,734,426
_2553
Psest_2554: Psest_2554 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 2,734,465 to 2,736,495
_2554
Position (kb)
2734
2735 Strain fitness (log2 ratio)
-1
0
1
2 at 2733.303 kb on + strand, within Psest_2552 at 2733.304 kb on - strand, within Psest_2552 at 2733.657 kb on + strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.658 kb on - strand, within Psest_2552 at 2733.660 kb on - strand, within Psest_2552 at 2733.773 kb on + strand at 2733.774 kb on - strand at 2734.001 kb on - strand at 2734.290 kb on + strand, within Psest_2553 at 2734.388 kb on - strand at 2734.413 kb on - strand at 2734.426 kb on + strand at 2734.427 kb on - strand at 2734.430 kb on + strand at 2734.430 kb on + strand at 2734.431 kb on - strand at 2734.431 kb on - strand at 2734.431 kb on - strand at 2734.431 kb on - strand at 2734.697 kb on + strand, within Psest_2554 at 2734.698 kb on - strand, within Psest_2554 at 2734.812 kb on - strand, within Psest_2554 at 2734.812 kb on - strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.949 kb on + strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2734.950 kb on - strand, within Psest_2554 at 2735.037 kb on - strand, within Psest_2554 at 2735.201 kb on + strand, within Psest_2554 at 2735.202 kb on - strand, within Psest_2554 at 2735.202 kb on - strand, within Psest_2554 at 2735.202 kb on - strand, within Psest_2554 at 2735.216 kb on + strand, within Psest_2554 at 2735.217 kb on - strand, within Psest_2554 at 2735.217 kb on - strand, within Psest_2554 at 2735.217 kb on - strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.390 kb on + strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554 at 2735.391 kb on - strand, within Psest_2554
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 2,733,303 + Psest_2552 0.63 -0.0 2,733,304 - Psest_2552 0.63 +1.0 2,733,657 + Psest_2552 0.89 -0.9 2,733,658 - Psest_2552 0.89 +1.8 2,733,658 - Psest_2552 0.89 +1.9 2,733,658 - Psest_2552 0.89 +1.1 2,733,658 - Psest_2552 0.89 -0.2 2,733,658 - Psest_2552 0.89 +1.4 2,733,660 - Psest_2552 0.89 +1.0 2,733,773 + +0.4 2,733,774 - -0.3 2,734,001 - +1.2 2,734,290 + Psest_2553 0.68 -0.1 2,734,388 - +0.6 2,734,413 - -1.6 2,734,426 + -0.8 2,734,427 - +1.2 2,734,430 + +0.9 2,734,430 + +0.8 2,734,431 - +0.8 2,734,431 - +1.4 2,734,431 - +0.2 2,734,431 - -0.3 2,734,697 + Psest_2554 0.11 -0.1 2,734,698 - Psest_2554 0.11 +0.1 2,734,812 - Psest_2554 0.17 +1.5 2,734,812 - Psest_2554 0.17 +1.4 2,734,949 + Psest_2554 0.24 -0.5 2,734,949 + Psest_2554 0.24 +0.4 2,734,949 + Psest_2554 0.24 -1.1 2,734,949 + Psest_2554 0.24 +0.2 2,734,949 + Psest_2554 0.24 +0.0 2,734,950 - Psest_2554 0.24 +0.2 2,734,950 - Psest_2554 0.24 +0.5 2,734,950 - Psest_2554 0.24 +1.7 2,734,950 - Psest_2554 0.24 +2.1 2,735,037 - Psest_2554 0.28 -0.3 2,735,201 + Psest_2554 0.36 +0.4 2,735,202 - Psest_2554 0.36 -0.5 2,735,202 - Psest_2554 0.36 -1.7 2,735,202 - Psest_2554 0.36 +2.2 2,735,216 + Psest_2554 0.37 +0.1 2,735,217 - Psest_2554 0.37 +1.6 2,735,217 - Psest_2554 0.37 +1.7 2,735,217 - Psest_2554 0.37 -0.9 2,735,390 + Psest_2554 0.46 +0.2 2,735,390 + Psest_2554 0.46 +1.5 2,735,390 + Psest_2554 0.46 +0.5 2,735,390 + Psest_2554 0.46 +0.2 2,735,390 + Psest_2554 0.46 +0.5 2,735,390 + Psest_2554 0.46 -1.1 2,735,390 + Psest_2554 0.46 +0.4 2,735,391 - Psest_2554 0.46 -1.3 2,735,391 - Psest_2554 0.46 +0.4 2,735,391 - Psest_2554 0.46 -0.8 2,735,391 - Psest_2554 0.46 -0.5
Or see this region's nucleotide sequence