Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2425 and Psest_2426 are separated by 118 nucleotides Psest_2426 and Psest_2427 are separated by 520 nucleotides
Psest_2425: Psest_2425 - Trk-type K+ transport systems, membrane components, at 2,588,129 to 2,589,457
_2425
Psest_2426: Psest_2426 - PAS domain S-box, at 2,589,576 to 2,592,041
_2426
Psest_2427: Psest_2427 - SH3 domain protein, at 2,592,562 to 2,593,236
_2427
Position (kb)
2589
2590
2591
2592
2593 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2589.071 kb on - strand, within Psest_2425 at 2589.119 kb on + strand, within Psest_2425 at 2589.267 kb on + strand, within Psest_2425 at 2589.267 kb on + strand, within Psest_2425 at 2589.268 kb on - strand, within Psest_2425 at 2589.578 kb on - strand at 2589.863 kb on + strand, within Psest_2426 at 2589.882 kb on + strand, within Psest_2426 at 2589.883 kb on - strand, within Psest_2426 at 2589.883 kb on - strand, within Psest_2426 at 2589.899 kb on + strand, within Psest_2426 at 2589.900 kb on - strand, within Psest_2426 at 2589.900 kb on - strand, within Psest_2426 at 2589.900 kb on - strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.002 kb on + strand, within Psest_2426 at 2590.003 kb on - strand, within Psest_2426 at 2590.003 kb on - strand, within Psest_2426 at 2590.003 kb on - strand, within Psest_2426 at 2590.018 kb on + strand, within Psest_2426 at 2590.018 kb on + strand, within Psest_2426 at 2590.019 kb on - strand, within Psest_2426 at 2590.093 kb on + strand, within Psest_2426 at 2590.093 kb on + strand, within Psest_2426 at 2590.093 kb on + strand, within Psest_2426 at 2590.094 kb on - strand, within Psest_2426 at 2590.094 kb on - strand, within Psest_2426 at 2590.094 kb on - strand, within Psest_2426 at 2590.094 kb on - strand, within Psest_2426 at 2590.220 kb on - strand, within Psest_2426 at 2590.573 kb on + strand, within Psest_2426 at 2590.573 kb on + strand, within Psest_2426 at 2590.573 kb on + strand, within Psest_2426 at 2590.573 kb on + strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.574 kb on - strand, within Psest_2426 at 2590.924 kb on + strand, within Psest_2426 at 2591.395 kb on + strand, within Psest_2426 at 2591.395 kb on + strand, within Psest_2426 at 2591.396 kb on - strand, within Psest_2426 at 2591.396 kb on - strand, within Psest_2426 at 2591.396 kb on - strand, within Psest_2426 at 2591.719 kb on + strand, within Psest_2426 at 2591.828 kb on + strand at 2591.828 kb on + strand at 2591.829 kb on - strand at 2591.829 kb on - strand at 2592.057 kb on - strand at 2592.121 kb on + strand at 2592.121 kb on + strand at 2592.121 kb on + strand at 2592.121 kb on + strand at 2592.122 kb on - strand at 2592.122 kb on - strand at 2592.122 kb on - strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.723 kb on + strand, within Psest_2427 at 2592.723 kb on + strand, within Psest_2427 at 2592.723 kb on + strand, within Psest_2427 at 2592.817 kb on + strand, within Psest_2427 at 2592.971 kb on + strand, within Psest_2427 at 2592.972 kb on - strand, within Psest_2427
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 2,589,071 - Psest_2425 0.71 +1.1 2,589,119 + Psest_2425 0.74 -0.8 2,589,267 + Psest_2425 0.86 -2.0 2,589,267 + Psest_2425 0.86 -0.8 2,589,268 - Psest_2425 0.86 -1.3 2,589,578 - -0.1 2,589,863 + Psest_2426 0.12 -1.6 2,589,882 + Psest_2426 0.12 -2.2 2,589,883 - Psest_2426 0.12 -0.4 2,589,883 - Psest_2426 0.12 -1.8 2,589,899 + Psest_2426 0.13 -1.6 2,589,900 - Psest_2426 0.13 -1.4 2,589,900 - Psest_2426 0.13 -2.1 2,589,900 - Psest_2426 0.13 -2.5 2,590,002 + Psest_2426 0.17 -0.8 2,590,002 + Psest_2426 0.17 -0.4 2,590,002 + Psest_2426 0.17 -1.7 2,590,002 + Psest_2426 0.17 -0.4 2,590,002 + Psest_2426 0.17 -0.9 2,590,002 + Psest_2426 0.17 -0.6 2,590,002 + Psest_2426 0.17 -1.6 2,590,003 - Psest_2426 0.17 -0.6 2,590,003 - Psest_2426 0.17 +0.2 2,590,003 - Psest_2426 0.17 +0.2 2,590,018 + Psest_2426 0.18 -0.3 2,590,018 + Psest_2426 0.18 -0.9 2,590,019 - Psest_2426 0.18 -2.4 2,590,093 + Psest_2426 0.21 +0.4 2,590,093 + Psest_2426 0.21 -0.7 2,590,093 + Psest_2426 0.21 -1.9 2,590,094 - Psest_2426 0.21 -2.0 2,590,094 - Psest_2426 0.21 -0.9 2,590,094 - Psest_2426 0.21 -3.4 2,590,094 - Psest_2426 0.21 -2.2 2,590,220 - Psest_2426 0.26 -1.7 2,590,573 + Psest_2426 0.40 +0.2 2,590,573 + Psest_2426 0.40 -2.0 2,590,573 + Psest_2426 0.40 -0.4 2,590,573 + Psest_2426 0.40 -1.6 2,590,574 - Psest_2426 0.40 +0.3 2,590,574 - Psest_2426 0.40 +1.2 2,590,574 - Psest_2426 0.40 -1.5 2,590,574 - Psest_2426 0.40 -1.5 2,590,574 - Psest_2426 0.40 -1.9 2,590,574 - Psest_2426 0.40 -2.4 2,590,574 - Psest_2426 0.40 -1.1 2,590,574 - Psest_2426 0.40 -0.4 2,590,574 - Psest_2426 0.40 +1.2 2,590,574 - Psest_2426 0.40 -1.5 2,590,574 - Psest_2426 0.40 -3.1 2,590,574 - Psest_2426 0.40 -3.0 2,590,924 + Psest_2426 0.55 -0.6 2,591,395 + Psest_2426 0.74 -3.9 2,591,395 + Psest_2426 0.74 -1.8 2,591,396 - Psest_2426 0.74 -0.0 2,591,396 - Psest_2426 0.74 -2.4 2,591,396 - Psest_2426 0.74 -0.8 2,591,719 + Psest_2426 0.87 -2.5 2,591,828 + -1.6 2,591,828 + -1.1 2,591,829 - -1.0 2,591,829 - -0.0 2,592,057 - -0.6 2,592,121 + -2.2 2,592,121 + -2.7 2,592,121 + -3.0 2,592,121 + -3.3 2,592,122 - +2.5 2,592,122 - +1.2 2,592,122 - +1.0 2,592,569 + +0.3 2,592,569 + -1.8 2,592,569 + -1.0 2,592,569 + -2.0 2,592,569 + +0.4 2,592,570 - +2.6 2,592,570 - +2.5 2,592,570 - +2.4 2,592,570 - +2.1 2,592,723 + Psest_2427 0.24 +0.3 2,592,723 + Psest_2427 0.24 -0.9 2,592,723 + Psest_2427 0.24 +0.0 2,592,817 + Psest_2427 0.38 +0.1 2,592,971 + Psest_2427 0.61 -0.3 2,592,972 - Psest_2427 0.61 +1.8
Or see this region's nucleotide sequence