Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2082 and Psest_2083 are separated by 209 nucleotides Psest_2083 and Psest_2084 are separated by 58 nucleotides Psest_2084 and Psest_2085 are separated by 181 nucleotides
Psest_2082: Psest_2082 - Predicted aminoglycoside phosphotransferase, at 2,211,568 to 2,212,635
_2082
Psest_2083: Psest_2083 - Putative sterol carrier protein, at 2,212,845 to 2,213,159
_2083
Psest_2084: Psest_2084 - Fructose-2,6-bisphosphatase, at 2,213,218 to 2,213,916
_2084
Psest_2085: Psest_2085 - Periplasmic serine proteases (ClpP class), at 2,214,098 to 2,215,120
_2085
Position (kb)
2212
2213
2214 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2212.095 kb on - strand, within Psest_2082 at 2212.130 kb on + strand, within Psest_2082 at 2212.131 kb on + strand, within Psest_2082 at 2212.200 kb on + strand, within Psest_2082 at 2212.261 kb on + strand, within Psest_2082 at 2212.261 kb on + strand, within Psest_2082 at 2212.262 kb on - strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.304 kb on + strand, within Psest_2082 at 2212.305 kb on - strand, within Psest_2082 at 2212.305 kb on - strand, within Psest_2082 at 2212.318 kb on + strand, within Psest_2082 at 2212.318 kb on + strand, within Psest_2082 at 2212.318 kb on + strand, within Psest_2082 at 2212.319 kb on - strand, within Psest_2082 at 2212.319 kb on - strand, within Psest_2082 at 2212.341 kb on - strand, within Psest_2082 at 2212.346 kb on + strand, within Psest_2082 at 2212.346 kb on + strand, within Psest_2082 at 2212.346 kb on + strand, within Psest_2082 at 2212.346 kb on + strand, within Psest_2082 at 2212.347 kb on - strand, within Psest_2082 at 2212.475 kb on + strand, within Psest_2082 at 2212.487 kb on + strand, within Psest_2082 at 2212.487 kb on + strand, within Psest_2082 at 2212.487 kb on + strand, within Psest_2082 at 2212.565 kb on + strand at 2212.565 kb on + strand at 2212.566 kb on - strand at 2212.566 kb on - strand at 2212.566 kb on - strand at 2212.566 kb on - strand at 2212.566 kb on - strand at 2212.626 kb on + strand at 2212.652 kb on + strand at 2212.679 kb on - strand at 2212.683 kb on + strand at 2212.683 kb on + strand at 2212.683 kb on + strand at 2212.684 kb on - strand at 2212.684 kb on - strand at 2212.684 kb on - strand at 2212.684 kb on - strand at 2212.684 kb on - strand at 2212.684 kb on - strand at 2212.786 kb on - strand at 2213.047 kb on + strand, within Psest_2083 at 2213.048 kb on - strand, within Psest_2083 at 2213.048 kb on - strand, within Psest_2083 at 2213.048 kb on - strand, within Psest_2083 at 2213.048 kb on - strand, within Psest_2083 at 2213.050 kb on + strand, within Psest_2083 at 2213.050 kb on + strand, within Psest_2083 at 2213.050 kb on + strand, within Psest_2083 at 2213.050 kb on + strand, within Psest_2083 at 2213.051 kb on - strand, within Psest_2083 at 2213.051 kb on - strand, within Psest_2083 at 2213.051 kb on - strand, within Psest_2083 at 2213.223 kb on + strand at 2213.223 kb on + strand at 2213.223 kb on + strand at 2213.223 kb on + strand at 2213.223 kb on + strand at 2213.224 kb on - strand at 2213.224 kb on - strand at 2213.272 kb on - strand at 2213.272 kb on - strand at 2213.272 kb on - strand at 2213.390 kb on - strand, within Psest_2084 at 2213.555 kb on + strand, within Psest_2084 at 2213.555 kb on + strand, within Psest_2084 at 2213.555 kb on + strand, within Psest_2084 at 2213.555 kb on + strand, within Psest_2084 at 2213.556 kb on - strand, within Psest_2084 at 2213.556 kb on - strand, within Psest_2084 at 2213.556 kb on - strand, within Psest_2084 at 2213.556 kb on - strand, within Psest_2084 at 2213.556 kb on - strand, within Psest_2084 at 2213.556 kb on - strand, within Psest_2084 at 2213.607 kb on + strand, within Psest_2084 at 2213.811 kb on - strand, within Psest_2084 at 2213.861 kb on + strand at 2213.903 kb on + strand at 2213.903 kb on + strand at 2213.903 kb on + strand at 2213.903 kb on + strand at 2213.904 kb on - strand at 2213.953 kb on + strand at 2214.092 kb on + strand at 2214.092 kb on + strand at 2214.092 kb on + strand at 2214.093 kb on - strand at 2214.095 kb on + strand at 2214.095 kb on + strand at 2214.095 kb on + strand at 2214.096 kb on - strand at 2214.096 kb on - strand at 2214.096 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 2,212,095 - Psest_2082 0.49 +0.3 2,212,130 + Psest_2082 0.53 -1.6 2,212,131 + Psest_2082 0.53 +0.3 2,212,200 + Psest_2082 0.59 -3.1 2,212,261 + Psest_2082 0.65 +0.1 2,212,261 + Psest_2082 0.65 -1.2 2,212,262 - Psest_2082 0.65 -1.1 2,212,304 + Psest_2082 0.69 -0.6 2,212,304 + Psest_2082 0.69 +0.1 2,212,304 + Psest_2082 0.69 +1.5 2,212,304 + Psest_2082 0.69 -1.9 2,212,304 + Psest_2082 0.69 +1.4 2,212,304 + Psest_2082 0.69 -2.3 2,212,304 + Psest_2082 0.69 -0.3 2,212,305 - Psest_2082 0.69 -0.1 2,212,305 - Psest_2082 0.69 +0.2 2,212,318 + Psest_2082 0.70 -0.2 2,212,318 + Psest_2082 0.70 +1.2 2,212,318 + Psest_2082 0.70 +1.1 2,212,319 - Psest_2082 0.70 +0.6 2,212,319 - Psest_2082 0.70 -0.1 2,212,341 - Psest_2082 0.72 -1.1 2,212,346 + Psest_2082 0.73 +0.2 2,212,346 + Psest_2082 0.73 -0.1 2,212,346 + Psest_2082 0.73 +1.3 2,212,346 + Psest_2082 0.73 +0.5 2,212,347 - Psest_2082 0.73 +0.5 2,212,475 + Psest_2082 0.85 +0.6 2,212,487 + Psest_2082 0.86 -0.5 2,212,487 + Psest_2082 0.86 +0.8 2,212,487 + Psest_2082 0.86 +0.9 2,212,565 + +0.4 2,212,565 + -0.3 2,212,566 - +0.5 2,212,566 - -2.9 2,212,566 - -1.4 2,212,566 - +1.3 2,212,566 - +0.4 2,212,626 + -0.6 2,212,652 + +1.3 2,212,679 - +0.2 2,212,683 + +0.3 2,212,683 + +1.8 2,212,683 + +0.3 2,212,684 - -0.7 2,212,684 - -0.4 2,212,684 - +0.4 2,212,684 - +0.3 2,212,684 - +2.7 2,212,684 - +0.1 2,212,786 - -0.1 2,213,047 + Psest_2083 0.64 +1.9 2,213,048 - Psest_2083 0.64 +2.3 2,213,048 - Psest_2083 0.64 +2.1 2,213,048 - Psest_2083 0.64 +3.1 2,213,048 - Psest_2083 0.64 +3.0 2,213,050 + Psest_2083 0.65 +2.7 2,213,050 + Psest_2083 0.65 +2.3 2,213,050 + Psest_2083 0.65 -0.0 2,213,050 + Psest_2083 0.65 +2.0 2,213,051 - Psest_2083 0.65 +2.8 2,213,051 - Psest_2083 0.65 +2.2 2,213,051 - Psest_2083 0.65 +3.2 2,213,223 + +2.1 2,213,223 + +3.3 2,213,223 + +2.1 2,213,223 + +2.1 2,213,223 + +1.8 2,213,224 - +0.6 2,213,224 - +0.1 2,213,272 - +3.4 2,213,272 - -1.1 2,213,272 - -0.4 2,213,390 - Psest_2084 0.25 +0.5 2,213,555 + Psest_2084 0.48 +1.0 2,213,555 + Psest_2084 0.48 +0.1 2,213,555 + Psest_2084 0.48 +1.4 2,213,555 + Psest_2084 0.48 +1.3 2,213,556 - Psest_2084 0.48 -0.8 2,213,556 - Psest_2084 0.48 -1.6 2,213,556 - Psest_2084 0.48 -0.2 2,213,556 - Psest_2084 0.48 -1.3 2,213,556 - Psest_2084 0.48 +0.3 2,213,556 - Psest_2084 0.48 -2.1 2,213,607 + Psest_2084 0.56 +0.4 2,213,811 - Psest_2084 0.85 -0.2 2,213,861 + +1.1 2,213,903 + +2.6 2,213,903 + +0.4 2,213,903 + +1.4 2,213,903 + +1.8 2,213,904 - +1.0 2,213,953 + -0.7 2,214,092 + -0.2 2,214,092 + -0.3 2,214,092 + +1.3 2,214,093 - -0.3 2,214,095 + -0.7 2,214,095 + +1.3 2,214,095 + +0.3 2,214,096 - -0.6 2,214,096 - -1.3 2,214,096 - +1.4
Or see this region's nucleotide sequence