Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1933 and Psest_1934 overlap by 4 nucleotides Psest_1934 and Psest_1935 are separated by 163 nucleotides
Psest_1933: Psest_1933 - hexose kinase, 1-phosphofructokinase family, at 2,045,769 to 2,046,707
_1933
Psest_1934: Psest_1934 - Predicted thioesterase, at 2,046,704 to 2,047,147
_1934
Psest_1935: Psest_1935 - hypothetical protein, at 2,047,311 to 2,048,030
_1935
Position (kb)
2046
2047
2048 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2045.738 kb on - strand at 2045.763 kb on + strand at 2045.764 kb on - strand at 2046.168 kb on + strand, within Psest_1933 at 2046.168 kb on + strand, within Psest_1933 at 2046.168 kb on + strand, within Psest_1933 at 2046.169 kb on - strand, within Psest_1933 at 2046.169 kb on - strand, within Psest_1933 at 2046.226 kb on + strand, within Psest_1933 at 2046.227 kb on - strand, within Psest_1933 at 2046.315 kb on + strand, within Psest_1933 at 2046.465 kb on + strand, within Psest_1933 at 2046.465 kb on + strand, within Psest_1933 at 2046.465 kb on + strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.466 kb on - strand, within Psest_1933 at 2046.472 kb on - strand, within Psest_1933 at 2046.652 kb on + strand at 2046.652 kb on + strand at 2046.652 kb on + strand at 2046.705 kb on + strand at 2046.706 kb on - strand at 2046.778 kb on - strand, within Psest_1934 at 2046.784 kb on - strand, within Psest_1934 at 2046.784 kb on - strand, within Psest_1934 at 2046.864 kb on + strand, within Psest_1934 at 2046.865 kb on - strand, within Psest_1934 at 2046.929 kb on - strand, within Psest_1934 at 2046.929 kb on - strand, within Psest_1934 at 2046.929 kb on - strand, within Psest_1934 at 2046.930 kb on + strand, within Psest_1934 at 2046.930 kb on + strand, within Psest_1934 at 2046.930 kb on + strand, within Psest_1934 at 2046.930 kb on + strand, within Psest_1934 at 2046.930 kb on + strand, within Psest_1934 at 2046.930 kb on + strand, within Psest_1934 at 2046.931 kb on - strand, within Psest_1934 at 2046.931 kb on - strand, within Psest_1934 at 2046.931 kb on - strand, within Psest_1934 at 2046.931 kb on - strand, within Psest_1934 at 2047.001 kb on + strand, within Psest_1934 at 2047.001 kb on + strand, within Psest_1934 at 2047.001 kb on + strand, within Psest_1934 at 2047.001 kb on + strand, within Psest_1934 at 2047.002 kb on - strand, within Psest_1934 at 2047.002 kb on - strand, within Psest_1934 at 2047.030 kb on + strand, within Psest_1934 at 2047.030 kb on + strand, within Psest_1934 at 2047.182 kb on + strand at 2047.183 kb on - strand at 2047.183 kb on - strand at 2047.588 kb on - strand, within Psest_1935 at 2047.679 kb on + strand, within Psest_1935 at 2047.679 kb on + strand, within Psest_1935 at 2047.680 kb on - strand, within Psest_1935 at 2047.680 kb on - strand, within Psest_1935 at 2047.680 kb on - strand, within Psest_1935 at 2047.680 kb on - strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.683 kb on + strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.684 kb on - strand, within Psest_1935 at 2047.766 kb on - strand, within Psest_1935
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 2,045,738 - +1.6 2,045,763 + -1.7 2,045,764 - +1.1 2,046,168 + Psest_1933 0.42 -0.9 2,046,168 + Psest_1933 0.42 -0.3 2,046,168 + Psest_1933 0.42 +0.1 2,046,169 - Psest_1933 0.43 +0.5 2,046,169 - Psest_1933 0.43 -0.2 2,046,226 + Psest_1933 0.49 -0.5 2,046,227 - Psest_1933 0.49 -0.7 2,046,315 + Psest_1933 0.58 -0.5 2,046,465 + Psest_1933 0.74 -1.3 2,046,465 + Psest_1933 0.74 -0.7 2,046,465 + Psest_1933 0.74 -0.8 2,046,466 - Psest_1933 0.74 -0.5 2,046,466 - Psest_1933 0.74 -0.7 2,046,466 - Psest_1933 0.74 -0.3 2,046,466 - Psest_1933 0.74 +0.3 2,046,466 - Psest_1933 0.74 -0.0 2,046,466 - Psest_1933 0.74 -1.3 2,046,466 - Psest_1933 0.74 -0.6 2,046,472 - Psest_1933 0.75 -1.4 2,046,652 + -2.0 2,046,652 + +0.6 2,046,652 + -2.5 2,046,705 + -0.1 2,046,706 - -0.6 2,046,778 - Psest_1934 0.17 -1.5 2,046,784 - Psest_1934 0.18 -2.7 2,046,784 - Psest_1934 0.18 -0.9 2,046,864 + Psest_1934 0.36 +1.4 2,046,865 - Psest_1934 0.36 -1.6 2,046,929 - Psest_1934 0.51 -4.0 2,046,929 - Psest_1934 0.51 -1.0 2,046,929 - Psest_1934 0.51 -0.3 2,046,930 + Psest_1934 0.51 +0.6 2,046,930 + Psest_1934 0.51 -2.6 2,046,930 + Psest_1934 0.51 -0.5 2,046,930 + Psest_1934 0.51 -1.7 2,046,930 + Psest_1934 0.51 +0.1 2,046,930 + Psest_1934 0.51 +0.1 2,046,931 - Psest_1934 0.51 +0.3 2,046,931 - Psest_1934 0.51 -0.7 2,046,931 - Psest_1934 0.51 +0.1 2,046,931 - Psest_1934 0.51 -2.3 2,047,001 + Psest_1934 0.67 -2.2 2,047,001 + Psest_1934 0.67 -0.9 2,047,001 + Psest_1934 0.67 -0.9 2,047,001 + Psest_1934 0.67 -1.5 2,047,002 - Psest_1934 0.67 -0.1 2,047,002 - Psest_1934 0.67 +0.3 2,047,030 + Psest_1934 0.73 -3.3 2,047,030 + Psest_1934 0.73 -0.4 2,047,182 + +0.1 2,047,183 - -1.4 2,047,183 - -2.3 2,047,588 - Psest_1935 0.38 -0.1 2,047,679 + Psest_1935 0.51 +1.0 2,047,679 + Psest_1935 0.51 +0.5 2,047,680 - Psest_1935 0.51 -1.5 2,047,680 - Psest_1935 0.51 +0.1 2,047,680 - Psest_1935 0.51 +0.0 2,047,680 - Psest_1935 0.51 +0.7 2,047,683 + Psest_1935 0.52 -0.5 2,047,683 + Psest_1935 0.52 +0.2 2,047,683 + Psest_1935 0.52 +0.6 2,047,683 + Psest_1935 0.52 +0.0 2,047,683 + Psest_1935 0.52 +2.0 2,047,683 + Psest_1935 0.52 -0.7 2,047,683 + Psest_1935 0.52 +0.5 2,047,684 - Psest_1935 0.52 -0.4 2,047,684 - Psest_1935 0.52 -1.0 2,047,684 - Psest_1935 0.52 +0.8 2,047,684 - Psest_1935 0.52 -0.5 2,047,684 - Psest_1935 0.52 -3.0 2,047,684 - Psest_1935 0.52 +0.5 2,047,684 - Psest_1935 0.52 -0.5 2,047,684 - Psest_1935 0.52 -1.2 2,047,684 - Psest_1935 0.52 -0.6 2,047,684 - Psest_1935 0.52 +0.2 2,047,684 - Psest_1935 0.52 +0.5 2,047,684 - Psest_1935 0.52 -0.7 2,047,684 - Psest_1935 0.52 -0.4 2,047,684 - Psest_1935 0.52 -1.9 2,047,766 - Psest_1935 0.63 -0.0
Or see this region's nucleotide sequence