Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1841 and Psest_1842 are separated by 110 nucleotides Psest_1842 and Psest_1843 are separated by 80 nucleotides Psest_1843 and Psest_1844 are separated by 52 nucleotides
Psest_1841: Psest_1841 - lipid kinase YegS, at 1,945,158 to 1,946,069
_1841
Psest_1842: Psest_1842 - Chemotaxis signal transduction protein, at 1,946,180 to 1,947,112
_1842
Psest_1843: Psest_1843 - Uncharacterized Fe-S protein, at 1,947,193 to 1,947,993
_1843
Psest_1844: Psest_1844 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,948,046 to 1,949,968
_1844
Position (kb)
1946
1947
1948 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.495 kb on + strand, within Psest_1841 at 1945.496 kb on - strand, within Psest_1841 at 1945.496 kb on - strand, within Psest_1841 at 1945.553 kb on + strand, within Psest_1841 at 1945.632 kb on + strand, within Psest_1841 at 1945.633 kb on - strand, within Psest_1841 at 1945.633 kb on - strand, within Psest_1841 at 1945.746 kb on - strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.810 kb on + strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.811 kb on - strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.814 kb on + strand, within Psest_1841 at 1945.815 kb on - strand, within Psest_1841 at 1945.815 kb on - strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.861 kb on + strand, within Psest_1841 at 1945.862 kb on - strand, within Psest_1841 at 1945.862 kb on - strand, within Psest_1841 at 1945.862 kb on - strand, within Psest_1841 at 1946.120 kb on + strand at 1946.120 kb on + strand at 1946.150 kb on + strand at 1946.150 kb on + strand at 1946.151 kb on - strand at 1946.347 kb on + strand, within Psest_1842 at 1946.347 kb on + strand, within Psest_1842 at 1946.348 kb on - strand, within Psest_1842 at 1946.468 kb on + strand, within Psest_1842 at 1946.468 kb on + strand, within Psest_1842 at 1946.469 kb on - strand, within Psest_1842 at 1946.574 kb on - strand, within Psest_1842 at 1946.655 kb on - strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.966 kb on + strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.967 kb on - strand, within Psest_1842 at 1946.974 kb on - strand, within Psest_1842 at 1947.139 kb on + strand at 1947.139 kb on + strand at 1947.140 kb on - strand at 1947.158 kb on + strand at 1947.158 kb on + strand at 1947.159 kb on - strand at 1947.159 kb on - strand at 1947.595 kb on + strand, within Psest_1843 at 1947.703 kb on - strand, within Psest_1843 at 1947.759 kb on + strand, within Psest_1843 at 1948.047 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 1,945,495 + Psest_1841 0.37 +1.7 1,945,495 + Psest_1841 0.37 -1.0 1,945,495 + Psest_1841 0.37 -2.1 1,945,495 + Psest_1841 0.37 +0.7 1,945,495 + Psest_1841 0.37 -1.6 1,945,495 + Psest_1841 0.37 +0.9 1,945,496 - Psest_1841 0.37 -2.6 1,945,496 - Psest_1841 0.37 -0.6 1,945,553 + Psest_1841 0.43 +2.9 1,945,632 + Psest_1841 0.52 +0.2 1,945,633 - Psest_1841 0.52 +0.6 1,945,633 - Psest_1841 0.52 -1.4 1,945,746 - Psest_1841 0.64 -1.1 1,945,810 + Psest_1841 0.71 +1.1 1,945,810 + Psest_1841 0.71 +1.0 1,945,810 + Psest_1841 0.71 +1.2 1,945,810 + Psest_1841 0.71 +0.7 1,945,810 + Psest_1841 0.71 +1.6 1,945,810 + Psest_1841 0.71 +0.2 1,945,810 + Psest_1841 0.71 +1.2 1,945,810 + Psest_1841 0.71 +1.3 1,945,810 + Psest_1841 0.71 +0.8 1,945,810 + Psest_1841 0.71 +1.7 1,945,810 + Psest_1841 0.71 +1.6 1,945,810 + Psest_1841 0.71 +0.3 1,945,810 + Psest_1841 0.71 +3.2 1,945,810 + Psest_1841 0.71 +1.9 1,945,810 + Psest_1841 0.71 +1.7 1,945,810 + Psest_1841 0.71 +2.7 1,945,810 + Psest_1841 0.71 -1.0 1,945,810 + Psest_1841 0.71 +1.1 1,945,810 + Psest_1841 0.71 +1.6 1,945,810 + Psest_1841 0.71 +0.2 1,945,811 - Psest_1841 0.72 -2.9 1,945,811 - Psest_1841 0.72 -1.4 1,945,811 - Psest_1841 0.72 -2.3 1,945,811 - Psest_1841 0.72 -0.4 1,945,811 - Psest_1841 0.72 -0.8 1,945,811 - Psest_1841 0.72 -2.1 1,945,811 - Psest_1841 0.72 -2.4 1,945,811 - Psest_1841 0.72 +0.2 1,945,811 - Psest_1841 0.72 -0.6 1,945,814 + Psest_1841 0.72 -0.0 1,945,814 + Psest_1841 0.72 +1.8 1,945,814 + Psest_1841 0.72 +1.1 1,945,814 + Psest_1841 0.72 +0.6 1,945,815 - Psest_1841 0.72 -0.1 1,945,815 - Psest_1841 0.72 -0.2 1,945,861 + Psest_1841 0.77 +2.5 1,945,861 + Psest_1841 0.77 -2.0 1,945,861 + Psest_1841 0.77 +2.6 1,945,861 + Psest_1841 0.77 +1.7 1,945,861 + Psest_1841 0.77 +1.6 1,945,862 - Psest_1841 0.77 -0.8 1,945,862 - Psest_1841 0.77 -2.5 1,945,862 - Psest_1841 0.77 -1.4 1,946,120 + -0.1 1,946,120 + +0.3 1,946,150 + -0.8 1,946,150 + +0.5 1,946,151 - -1.4 1,946,347 + Psest_1842 0.18 +1.2 1,946,347 + Psest_1842 0.18 -0.7 1,946,348 - Psest_1842 0.18 -1.8 1,946,468 + Psest_1842 0.31 +2.1 1,946,468 + Psest_1842 0.31 +2.7 1,946,469 - Psest_1842 0.31 +0.3 1,946,574 - Psest_1842 0.42 +0.8 1,946,655 - Psest_1842 0.51 +1.9 1,946,966 + Psest_1842 0.84 +0.9 1,946,966 + Psest_1842 0.84 +1.4 1,946,966 + Psest_1842 0.84 +0.8 1,946,966 + Psest_1842 0.84 +1.8 1,946,966 + Psest_1842 0.84 +2.0 1,946,966 + Psest_1842 0.84 +1.3 1,946,966 + Psest_1842 0.84 +1.5 1,946,966 + Psest_1842 0.84 +1.2 1,946,967 - Psest_1842 0.84 -2.0 1,946,967 - Psest_1842 0.84 -0.3 1,946,967 - Psest_1842 0.84 +0.4 1,946,967 - Psest_1842 0.84 +1.4 1,946,967 - Psest_1842 0.84 -0.4 1,946,967 - Psest_1842 0.84 -0.8 1,946,967 - Psest_1842 0.84 +0.4 1,946,974 - Psest_1842 0.85 -1.5 1,947,139 + +2.0 1,947,139 + +0.8 1,947,140 - +0.5 1,947,158 + +1.3 1,947,158 + +0.5 1,947,159 - +1.1 1,947,159 - +2.8 1,947,595 + Psest_1843 0.50 +1.0 1,947,703 - Psest_1843 0.64 -0.1 1,947,759 + Psest_1843 0.71 -1.7 1,948,047 + -1.0
Or see this region's nucleotide sequence