Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1739 and Psest_1740 are separated by 17 nucleotides Psest_1740 and Psest_1741 are separated by 74 nucleotides Psest_1741 and Psest_1742 are separated by 23 nucleotides Psest_1742 and Psest_1743 are separated by 11 nucleotides
Psest_1739: Psest_1739 - ATPases involved in chromosome partitioning, at 1,844,474 to 1,845,301
_1739
Psest_1740: Psest_1740 - RNA polymerase sigma factor, FliA/WhiG family, at 1,845,319 to 1,846,044
_1740
Psest_1741: Psest_1741 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,846,119 to 1,846,493
_1741
Psest_1742: Psest_1742 - Chemotaxis protein, at 1,846,517 to 1,847,311
_1742
Psest_1743: Psest_1743 - Chemotaxis protein histidine kinase and related kinases, at 1,847,323 to 1,849,494
_1743
Position (kb)
1846
1847 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1845.319 kb on - strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.326 kb on - strand at 1845.326 kb on - strand at 1845.484 kb on - strand, within Psest_1740 at 1845.490 kb on + strand, within Psest_1740 at 1845.523 kb on + strand, within Psest_1740 at 1845.523 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.687 kb on + strand, within Psest_1740 at 1845.688 kb on - strand, within Psest_1740 at 1845.688 kb on - strand, within Psest_1740 at 1845.692 kb on + strand, within Psest_1740 at 1845.693 kb on - strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.706 kb on + strand, within Psest_1740 at 1845.707 kb on - strand, within Psest_1740 at 1845.709 kb on + strand, within Psest_1740 at 1845.709 kb on + strand, within Psest_1740 at 1845.913 kb on + strand, within Psest_1740 at 1845.914 kb on - strand, within Psest_1740 at 1845.916 kb on + strand, within Psest_1740 at 1845.916 kb on + strand, within Psest_1740 at 1846.094 kb on + strand at 1846.094 kb on + strand at 1846.419 kb on + strand, within Psest_1741 at 1846.419 kb on + strand, within Psest_1741 at 1846.420 kb on - strand, within Psest_1741 at 1846.516 kb on + strand at 1846.516 kb on + strand at 1846.517 kb on - strand at 1846.664 kb on + strand, within Psest_1742 at 1846.665 kb on - strand, within Psest_1742 at 1846.784 kb on + strand, within Psest_1742 at 1846.784 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.859 kb on + strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.860 kb on - strand, within Psest_1742 at 1846.869 kb on - strand, within Psest_1742 at 1846.869 kb on - strand, within Psest_1742 at 1846.965 kb on - strand, within Psest_1742 at 1846.991 kb on - strand, within Psest_1742 at 1847.245 kb on + strand at 1847.322 kb on + strand at 1847.390 kb on + strand at 1847.391 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 1,845,319 - -0.8 1,845,322 + -1.2 1,845,322 + +0.1 1,845,322 + -1.3 1,845,322 + -0.0 1,845,322 + -2.5 1,845,322 + -1.1 1,845,322 + -0.8 1,845,322 + -1.4 1,845,322 + -2.1 1,845,322 + -0.9 1,845,322 + +0.1 1,845,322 + -1.6 1,845,322 + -1.1 1,845,322 + +0.2 1,845,323 - -0.2 1,845,323 - -2.8 1,845,323 - -2.3 1,845,323 - +0.6 1,845,323 - -1.8 1,845,323 - -0.9 1,845,323 - -3.7 1,845,323 - -1.6 1,845,323 - -1.3 1,845,323 - -2.6 1,845,323 - -2.1 1,845,323 - -2.0 1,845,326 - -2.1 1,845,326 - -1.6 1,845,484 - Psest_1740 0.23 -0.7 1,845,490 + Psest_1740 0.24 -2.3 1,845,523 + Psest_1740 0.28 -2.3 1,845,523 + Psest_1740 0.28 -1.8 1,845,687 + Psest_1740 0.51 +0.0 1,845,687 + Psest_1740 0.51 -1.8 1,845,687 + Psest_1740 0.51 -1.1 1,845,687 + Psest_1740 0.51 -0.6 1,845,687 + Psest_1740 0.51 -0.7 1,845,687 + Psest_1740 0.51 -1.4 1,845,687 + Psest_1740 0.51 -2.0 1,845,687 + Psest_1740 0.51 +0.2 1,845,688 - Psest_1740 0.51 -2.0 1,845,688 - Psest_1740 0.51 -3.5 1,845,692 + Psest_1740 0.51 -1.2 1,845,693 - Psest_1740 0.52 -1.8 1,845,706 + Psest_1740 0.53 -1.0 1,845,706 + Psest_1740 0.53 -2.1 1,845,706 + Psest_1740 0.53 +1.5 1,845,706 + Psest_1740 0.53 -2.3 1,845,706 + Psest_1740 0.53 +0.4 1,845,707 - Psest_1740 0.53 -2.0 1,845,709 + Psest_1740 0.54 -0.8 1,845,709 + Psest_1740 0.54 -1.9 1,845,913 + Psest_1740 0.82 -1.4 1,845,914 - Psest_1740 0.82 -0.3 1,845,916 + Psest_1740 0.82 -0.5 1,845,916 + Psest_1740 0.82 +1.8 1,846,094 + -1.4 1,846,094 + -1.8 1,846,419 + Psest_1741 0.80 -2.5 1,846,419 + Psest_1741 0.80 -1.9 1,846,420 - Psest_1741 0.80 -2.0 1,846,516 + +1.0 1,846,516 + -1.1 1,846,517 - -0.5 1,846,664 + Psest_1742 0.18 +1.5 1,846,665 - Psest_1742 0.19 -1.1 1,846,784 + Psest_1742 0.34 +0.8 1,846,784 + Psest_1742 0.34 +0.1 1,846,859 + Psest_1742 0.43 -1.5 1,846,859 + Psest_1742 0.43 +0.1 1,846,859 + Psest_1742 0.43 -1.4 1,846,859 + Psest_1742 0.43 +0.0 1,846,859 + Psest_1742 0.43 -0.6 1,846,860 - Psest_1742 0.43 -2.0 1,846,860 - Psest_1742 0.43 -0.1 1,846,860 - Psest_1742 0.43 +0.5 1,846,860 - Psest_1742 0.43 -1.5 1,846,860 - Psest_1742 0.43 +0.4 1,846,860 - Psest_1742 0.43 -2.0 1,846,860 - Psest_1742 0.43 -1.4 1,846,860 - Psest_1742 0.43 +0.4 1,846,860 - Psest_1742 0.43 -2.0 1,846,860 - Psest_1742 0.43 +0.2 1,846,869 - Psest_1742 0.44 -1.6 1,846,869 - Psest_1742 0.44 -0.4 1,846,965 - Psest_1742 0.56 -0.7 1,846,991 - Psest_1742 0.60 -1.2 1,847,245 + +0.1 1,847,322 + -2.2 1,847,390 + -5.3 1,847,391 - -2.4
Or see this region's nucleotide sequence