Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1730
Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Def Benzalkonium Chloride 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,835,524 | + | Psest_1729 | 0.28 | -0.2 | |
1,835,525 | - | Psest_1729 | 0.28 | -2.6 | |
1,835,539 | + | Psest_1729 | 0.30 | -1.4 | |
1,835,539 | + | Psest_1729 | 0.30 | -0.6 | |
1,835,539 | + | Psest_1729 | 0.30 | -1.3 | |
1,835,540 | - | Psest_1729 | 0.30 | -1.0 | |
1,835,540 | - | Psest_1729 | 0.30 | -2.5 | |
1,835,540 | - | Psest_1729 | 0.30 | -0.4 | |
1,835,782 | + | Psest_1729 | 0.55 | -1.9 | |
1,836,233 | + | +1.4 | |||
1,836,234 | - | -0.7 | |||
1,836,815 | + | Psest_1731 | 0.18 | +0.5 | |
1,837,174 | - | -2.2 | |||
1,837,269 | + | Psest_1732 | 0.14 | +0.5 | |
1,837,276 | - | Psest_1732 | 0.15 | -0.3 | |
1,837,280 | - | Psest_1732 | 0.16 | +0.1 | |
1,837,280 | - | Psest_1732 | 0.16 | -2.0 | |
1,837,539 | - | Psest_1732 | 0.49 | -1.7 | |
1,837,539 | - | Psest_1732 | 0.49 | +0.6 | |
1,837,661 | - | Psest_1732 | 0.65 | +0.6 | |
1,837,661 | - | Psest_1732 | 0.65 | -1.8 | |
1,837,661 | - | Psest_1732 | 0.65 | +1.2 |
Or see this region's nucleotide sequence