Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1502

Experiment: Def Benzalkonium Chloride 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_1500 and Psest_1501 overlap by 1 nucleotidesPsest_1501 and Psest_1502 overlap by 4 nucleotidesPsest_1502 and Psest_1503 are separated by 48 nucleotidesPsest_1503 and Psest_1504 are separated by 6 nucleotides Psest_1500: Psest_1500 - TolR protein, at 1,601,020 to 1,601,460 _1500 Psest_1501: Psest_1501 - TolA protein, at 1,601,460 to 1,602,461 _1501 Psest_1502: Psest_1502 - tol-pal system beta propeller repeat protein TolB, at 1,602,458 to 1,603,759 _1502 Psest_1503: Psest_1503 - peptidoglycan-associated lipoprotein, at 1,603,808 to 1,604,311 _1503 Psest_1504: Psest_1504 - tol-pal system protein YbgF, at 1,604,318 to 1,605,133 _1504 Position (kb) 1602 1603 1604Strain fitness (log2 ratio) -1 0 1at 1604.728 kb on + strand, within Psest_1504

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Per-strain Table

Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml
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1,604,728 + Psest_1504 0.50 +0.2

Or see this region's nucleotide sequence