Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1476 and Psest_1477 overlap by 4 nucleotides Psest_1477 and Psest_1478 are separated by 50 nucleotides Psest_1478 and Psest_1479 overlap by 8 nucleotides
Psest_1476: Psest_1476 - Predicted permease, at 1,581,244 to 1,582,341
_1476
Psest_1477: Psest_1477 - DnaA regulatory inactivator Hda, at 1,582,338 to 1,583,042
_1477
Psest_1478: Psest_1478 - Predicted membrane protein, at 1,583,093 to 1,583,503
_1478
Psest_1479: Psest_1479 - NAD(P)H:quinone oxidoreductase, type IV, at 1,583,496 to 1,584,101
_1479
Position (kb)
1582
1583
1584 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1581.361 kb on + strand, within Psest_1476 at 1581.362 kb on - strand, within Psest_1476 at 1581.512 kb on - strand, within Psest_1476 at 1581.645 kb on + strand, within Psest_1476 at 1581.646 kb on - strand, within Psest_1476 at 1581.665 kb on + strand, within Psest_1476 at 1581.681 kb on + strand, within Psest_1476 at 1581.682 kb on - strand, within Psest_1476 at 1581.748 kb on + strand, within Psest_1476 at 1581.748 kb on + strand, within Psest_1476 at 1581.748 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.989 kb on - strand, within Psest_1476 at 1582.082 kb on + strand, within Psest_1476 at 1582.082 kb on + strand, within Psest_1476 at 1582.083 kb on - strand, within Psest_1476 at 1582.083 kb on - strand, within Psest_1476 at 1582.083 kb on - strand, within Psest_1476 at 1582.086 kb on + strand, within Psest_1476 at 1582.276 kb on + strand at 1582.277 kb on - strand at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.197 kb on - strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.257 kb on + strand, within Psest_1478 at 1583.378 kb on + strand, within Psest_1478 at 1583.488 kb on + strand at 1583.489 kb on - strand at 1583.667 kb on - strand, within Psest_1479 at 1583.667 kb on - strand, within Psest_1479 at 1583.669 kb on - strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.921 kb on - strand, within Psest_1479
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 1,581,361 + Psest_1476 0.11 +1.8 1,581,362 - Psest_1476 0.11 -1.7 1,581,512 - Psest_1476 0.24 -0.8 1,581,645 + Psest_1476 0.37 +1.3 1,581,646 - Psest_1476 0.37 -2.6 1,581,665 + Psest_1476 0.38 -0.1 1,581,681 + Psest_1476 0.40 +1.3 1,581,682 - Psest_1476 0.40 +0.6 1,581,748 + Psest_1476 0.46 +2.0 1,581,748 + Psest_1476 0.46 -1.2 1,581,748 + Psest_1476 0.46 +1.8 1,581,907 + Psest_1476 0.60 +4.3 1,581,907 + Psest_1476 0.60 +0.3 1,581,907 + Psest_1476 0.60 +1.3 1,581,907 + Psest_1476 0.60 +2.1 1,581,907 + Psest_1476 0.60 +1.8 1,581,907 + Psest_1476 0.60 +1.3 1,581,907 + Psest_1476 0.60 +1.2 1,581,907 + Psest_1476 0.60 +1.6 1,581,907 + Psest_1476 0.60 +2.7 1,581,907 + Psest_1476 0.60 +1.8 1,581,907 + Psest_1476 0.60 +1.0 1,581,907 + Psest_1476 0.60 +1.5 1,581,907 + Psest_1476 0.60 +2.1 1,581,907 + Psest_1476 0.60 +1.5 1,581,908 - Psest_1476 0.60 -0.3 1,581,908 - Psest_1476 0.60 -1.3 1,581,908 - Psest_1476 0.60 -0.1 1,581,908 - Psest_1476 0.60 -0.4 1,581,921 + Psest_1476 0.62 +2.6 1,581,921 + Psest_1476 0.62 +1.2 1,581,921 + Psest_1476 0.62 +1.4 1,581,921 + Psest_1476 0.62 +2.4 1,581,922 - Psest_1476 0.62 +1.9 1,581,922 - Psest_1476 0.62 -0.3 1,581,922 - Psest_1476 0.62 +1.2 1,581,922 - Psest_1476 0.62 -0.0 1,581,988 + Psest_1476 0.68 -0.7 1,581,988 + Psest_1476 0.68 +2.9 1,581,988 + Psest_1476 0.68 +1.1 1,581,988 + Psest_1476 0.68 +1.0 1,581,988 + Psest_1476 0.68 +0.4 1,581,989 - Psest_1476 0.68 +0.4 1,582,082 + Psest_1476 0.76 +1.3 1,582,082 + Psest_1476 0.76 +2.9 1,582,083 - Psest_1476 0.76 -1.0 1,582,083 - Psest_1476 0.76 -1.7 1,582,083 - Psest_1476 0.76 -1.3 1,582,086 + Psest_1476 0.77 +2.4 1,582,276 + -0.5 1,582,277 - -1.4 1,583,142 + Psest_1478 0.12 +1.8 1,583,142 + Psest_1478 0.12 -1.0 1,583,142 + Psest_1478 0.12 +1.2 1,583,142 + Psest_1478 0.12 +2.3 1,583,142 + Psest_1478 0.12 +1.5 1,583,142 + Psest_1478 0.12 +0.2 1,583,143 - Psest_1478 0.12 +1.5 1,583,143 - Psest_1478 0.12 +1.4 1,583,143 - Psest_1478 0.12 +0.3 1,583,143 - Psest_1478 0.12 +0.8 1,583,143 - Psest_1478 0.12 +0.4 1,583,143 - Psest_1478 0.12 -1.0 1,583,143 - Psest_1478 0.12 +1.0 1,583,143 - Psest_1478 0.12 +1.9 1,583,143 - Psest_1478 0.12 +1.3 1,583,196 + Psest_1478 0.25 -0.0 1,583,196 + Psest_1478 0.25 +1.5 1,583,196 + Psest_1478 0.25 +1.6 1,583,196 + Psest_1478 0.25 +2.0 1,583,197 - Psest_1478 0.25 +1.3 1,583,244 + Psest_1478 0.37 +1.0 1,583,244 + Psest_1478 0.37 +1.6 1,583,244 + Psest_1478 0.37 +1.6 1,583,244 + Psest_1478 0.37 +1.4 1,583,257 + Psest_1478 0.40 +1.2 1,583,378 + Psest_1478 0.69 +1.2 1,583,488 + +1.2 1,583,489 - +1.4 1,583,667 - Psest_1479 0.28 +1.0 1,583,667 - Psest_1479 0.28 -0.5 1,583,669 - Psest_1479 0.29 -0.6 1,583,833 + Psest_1479 0.56 +0.4 1,583,833 + Psest_1479 0.56 -1.0 1,583,833 + Psest_1479 0.56 -1.9 1,583,834 - Psest_1479 0.56 +0.1 1,583,834 - Psest_1479 0.56 +1.3 1,583,834 - Psest_1479 0.56 +0.9 1,583,921 - Psest_1479 0.70 +0.3
Or see this region's nucleotide sequence