Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1460

Experiment: Def Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Benzalkonium Chloride 0.002 mg/ml
1,567,258	+		Psest_1458	0.25	+0.3
1,567,258	+		Psest_1458	0.25	-0.9
1,567,259	-		Psest_1458	0.25	-0.0
1,567,259	-		Psest_1458	0.25	-4.0
1,567,259	-		Psest_1458	0.25	-0.4
1,567,259	-		Psest_1458	0.25	+0.3
1,567,259	-		Psest_1458	0.25	+0.8
1,567,259	-		Psest_1458	0.25	+0.3
1,567,295	-		Psest_1458	0.42	-1.4
1,567,420	+				-0.0
1,567,421	-				+0.3
1,567,449	+				+2.0
1,567,450	-				-0.4
1,567,494	+				-0.3
1,567,494	+				-1.0
1,567,494	+				-2.7
1,567,494	+				-0.3
1,567,494	+				+0.1
1,567,494	+				+2.4
1,567,494	+				-1.1
1,567,495	-				+0.8
1,567,495	-				-0.0
1,567,495	-				-0.4
1,567,495	-				+0.4
1,567,495	-				-1.0
1,567,495	-				-1.4
1,567,495	-				-0.4
1,567,495	-				+0.2
1,567,543	+		Psest_1459	0.18	-1.2
1,567,543	+		Psest_1459	0.18	-1.5
1,567,544	-		Psest_1459	0.18	+1.3
1,567,544	-		Psest_1459	0.18	+0.6
1,567,545	+		Psest_1459	0.18	+0.7
1,567,545	+		Psest_1459	0.18	-1.0
1,567,603	-		Psest_1459	0.29	+0.9
1,567,797	-		Psest_1459	0.66	-2.3
1,567,797	-		Psest_1459	0.66	-0.5
1,567,836	+		Psest_1459	0.73	+0.8
1,567,836	+		Psest_1459	0.73	-1.4
1,568,069	+				+1.1
1,568,070	-				-0.6
1,568,085	-				+3.1
1,568,158	+				+1.9
1,568,158	+				-1.4
1,568,158	+				-0.3
1,568,158	+				-1.6
1,568,158	+				-0.7
1,568,159	-				+0.3
1,568,159	-				+0.4
1,568,159	-				-1.0
1,568,159	-				-0.4
1,568,199	+				+0.7
1,568,199	+				-0.4
1,568,199	+				+0.6
1,568,199	+				-1.3
1,568,199	+				-0.3
1,568,199	+				+0.2
1,568,199	+				+0.1
1,568,199	+				-0.2
1,568,199	+				-0.5
1,568,199	+				+0.4
1,568,200	-				-3.1
1,568,200	-				-2.1
1,568,203	+				-0.1
1,568,203	+				+0.5
1,568,203	+				-0.0
1,568,203	+				+0.7
1,568,203	+				-0.5
1,568,203	+				+0.1
1,568,203	+				-1.7
1,568,204	-				-0.5
1,568,204	-				-0.4
1,568,204	-				-0.5
1,568,204	-				+0.3
1,568,204	-				-0.0
1,568,204	-				-0.8
1,568,204	-				-0.0
1,568,204	-				+0.7
1,568,204	-				-1.2
1,568,204	-				-0.6
1,568,204	-				-0.7
1,568,310	+		Psest_1460	0.13	+0.2
1,568,310	+		Psest_1460	0.13	+1.6
1,568,310	+		Psest_1460	0.13	-0.4
1,568,310	+		Psest_1460	0.13	+2.0
1,568,310	+		Psest_1460	0.13	+0.3
1,568,311	-		Psest_1460	0.13	-1.5
1,568,311	-		Psest_1460	0.13	-1.7
1,568,424	+		Psest_1460	0.30	+0.7
1,568,637	-		Psest_1460	0.63	+0.6
1,568,637	-		Psest_1460	0.63	+0.4
1,568,721	+		Psest_1460	0.76	-0.7
1,568,721	+		Psest_1460	0.76	-2.0
1,568,721	+		Psest_1460	0.76	+0.6
1,568,722	-		Psest_1460	0.76	-0.5
1,568,722	-		Psest_1460	0.76	-0.3
1,568,838	+				+2.6
1,568,838	+				+1.5
1,568,925	+				-2.5
1,568,926	-				-0.1
1,568,926	-				+2.1
1,568,926	-				+1.8
1,568,926	-				+1.4
1,568,999	+		Psest_1461	0.14	+2.6
1,569,000	-		Psest_1461	0.14	-0.4
1,569,092	+		Psest_1461	0.24	-0.2
1,569,093	-		Psest_1461	0.24	-0.2
1,569,105	-		Psest_1461	0.25	-3.6
1,569,194	+		Psest_1461	0.35	-1.7
1,569,194	+		Psest_1461	0.35	-0.3
1,569,195	-		Psest_1461	0.35	-0.0
1,569,234	-		Psest_1461	0.39	-1.1
1,569,323	+		Psest_1461	0.49	+0.8
1,569,323	+		Psest_1461	0.49	+0.9
1,569,323	+		Psest_1461	0.49	+0.5
1,569,324	-		Psest_1461	0.49	+0.3
1,569,329	+		Psest_1461	0.49	-0.8
1,569,437	+		Psest_1461	0.61	-1.3
1,569,437	+		Psest_1461	0.61	+1.3
1,569,437	+		Psest_1461	0.61	+1.6
1,569,437	+		Psest_1461	0.61	+0.6
1,569,437	+		Psest_1461	0.61	+0.9
1,569,438	-		Psest_1461	0.61	+1.1
1,569,438	-		Psest_1461	0.61	+0.3
1,569,500	+		Psest_1461	0.68	+1.4
1,569,501	-		Psest_1461	0.68	+0.3
1,569,501	-		Psest_1461	0.68	+1.3
1,569,501	-		Psest_1461	0.68	-0.6
1,569,722	+				+2.3
1,569,747	+				+1.7
1,569,747	+				+1.1
1,569,747	+				+0.8
1,569,747	+				+2.4
1,569,748	-				-2.7
1,569,748	-				-0.3
1,569,748	-				-0.9
1,569,748	-				-1.7
1,569,790	-				-1.4
1,569,790	-				-0.3
1,569,794	+				-0.6
1,569,795	-				-1.6