Experiment: Def Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1255 and Psest_1256 are separated by 5 nucleotides Psest_1256 and Psest_1257 are separated by 12 nucleotides Psest_1257 and Psest_1258 are separated by 165 nucleotides Psest_1258 and Psest_1259 are separated by 19 nucleotides
Psest_1255: Psest_1255 - Fe-S protein assembly chaperone HscA, at 1,360,871 to 1,362,733
_1255
Psest_1256: Psest_1256 - ferredoxin, 2Fe-2S type, ISC system, at 1,362,739 to 1,363,077
_1256
Psest_1257: Psest_1257 - FeS assembly protein IscX, at 1,363,090 to 1,363,290
_1257
Psest_1258: Psest_1258 - Nucleoside diphosphate kinase, at 1,363,456 to 1,363,887
_1258
Psest_1259: Psest_1259 - 23S rRNA m2A2503 methyltransferase, at 1,363,907 to 1,365,055
_1259
Position (kb)
1362
1363
1364 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1362.559 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.098 kb on + strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.099 kb on - strand at 1363.374 kb on + strand at 1363.380 kb on + strand at 1363.381 kb on - strand at 1363.403 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzalkonium Chloride 0.002 mg/ml remove 1,362,559 + -1.0 1,363,098 + +1.7 1,363,098 + +0.4 1,363,098 + +1.6 1,363,098 + +0.5 1,363,098 + +1.2 1,363,098 + +1.2 1,363,098 + +1.7 1,363,098 + +1.8 1,363,099 - +0.6 1,363,099 - -1.0 1,363,099 - -1.6 1,363,099 - -0.2 1,363,099 - -2.1 1,363,099 - -0.2 1,363,099 - +0.1 1,363,099 - -1.2 1,363,099 - -0.6 1,363,374 + -0.2 1,363,380 + +0.2 1,363,381 - +0.7 1,363,403 + +0.2
Or see this region's nucleotide sequence