Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1017

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
1,102,392	-		Psest_1016	0.28	+1.5
1,102,392	-		Psest_1016	0.28	+2.2
1,102,563	-		Psest_1016	0.45	+0.5
1,102,563	-		Psest_1016	0.45	+1.2
1,102,580	+		Psest_1016	0.47	+0.9
1,102,581	-		Psest_1016	0.47	+0.5
1,102,581	-		Psest_1016	0.47	+0.2
1,102,844	-		Psest_1016	0.73	+0.9
1,103,026	+				-0.1
1,103,027	-				-1.1
1,103,027	-				-0.4
1,103,027	-				+0.7
1,103,147	+				-0.7
1,103,147	+				-0.1
1,103,147	+				-1.4
1,103,147	+				+0.9
1,103,148	-				+0.4
1,103,148	-				+1.7
1,103,344	+				-0.1
1,103,344	+				+3.2
1,103,344	+				+0.9
1,103,344	+				-0.7
1,103,345	-				+1.3
1,103,350	-				+0.9
1,103,388	-				-0.2
1,103,443	+		Psest_1017	0.10	-2.1
1,103,444	-		Psest_1017	0.10	-0.3
1,103,545	+		Psest_1017	0.18	-0.3
1,103,546	-		Psest_1017	0.18	-1.1
1,103,546	-		Psest_1017	0.18	-2.5
1,103,670	-		Psest_1017	0.28	-1.4
1,103,670	-		Psest_1017	0.28	-0.5
1,103,716	+		Psest_1017	0.32	-0.2
1,103,716	+		Psest_1017	0.32	-2.8
1,103,717	-		Psest_1017	0.32	-1.7
1,103,717	-		Psest_1017	0.32	-0.4
1,103,717	-		Psest_1017	0.32	-2.5
1,103,717	-		Psest_1017	0.32	-1.1
1,103,722	+		Psest_1017	0.33	-2.0
1,103,722	+		Psest_1017	0.33	-0.5
1,103,723	-		Psest_1017	0.33	-2.1
1,103,723	-		Psest_1017	0.33	+0.7
1,103,723	-		Psest_1017	0.33	-1.4
1,103,731	+		Psest_1017	0.33	-1.7
1,103,731	+		Psest_1017	0.33	-1.4
1,103,732	-		Psest_1017	0.33	-0.8
1,103,732	-		Psest_1017	0.33	-0.2
1,103,732	-		Psest_1017	0.33	-0.1
1,103,732	-		Psest_1017	0.33	-0.9
1,103,732	-		Psest_1017	0.33	+0.3
1,103,732	-		Psest_1017	0.33	-1.8
1,103,732	-		Psest_1017	0.33	-1.9
1,103,732	-		Psest_1017	0.33	-0.1
1,104,595	+				+0.2
1,104,601	-				-0.6
1,104,641	+				+0.8
1,104,641	+				+0.5
1,104,641	+				-0.6
1,104,695	+				+1.9
1,104,695	+				+0.5
1,104,695	+				-1.9
1,104,695	+				-1.4
1,104,695	+				-0.4
1,104,696	-				-1.3
1,104,696	-				+0.5
1,104,700	-				-0.5
1,104,748	+				-2.0
1,104,748	+				-0.3
1,104,749	-				-0.1
1,104,880	-		Psest_1018	0.24	-0.3
1,104,880	-		Psest_1018	0.24	-0.1
1,104,880	-		Psest_1018	0.24	+0.1
1,104,916	+		Psest_1018	0.28	+0.9
1,104,916	+		Psest_1018	0.28	+0.1
1,104,916	+		Psest_1018	0.28	-0.0
1,104,917	-		Psest_1018	0.28	-1.7
1,104,917	-		Psest_1018	0.28	-0.0
1,104,917	-		Psest_1018	0.28	-0.7
1,104,917	-		Psest_1018	0.28	-0.1
1,104,917	-		Psest_1018	0.28	+0.2
1,104,917	-		Psest_1018	0.28	-0.7
1,104,939	+		Psest_1018	0.30	+2.9
1,104,940	-		Psest_1018	0.30	+0.4
1,104,940	-		Psest_1018	0.30	-1.9