Experiment: Def Nalidixic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0745 and Psest_0746 are separated by 49 nucleotides Psest_0746 and Psest_0747 overlap by 1 nucleotides Psest_0747 and Psest_0748 are separated by 9 nucleotides Psest_0748 and Psest_0749 are separated by 359 nucleotides
Psest_0745: Psest_0745 - Domain of Unknown Function (DUF326)., at 817,937 to 818,266
_0745
Psest_0746: Psest_0746 - Protein of unknown function (DUF1826)., at 818,316 to 818,960
_0746
Psest_0747: Psest_0747 - Putative GTPases (G3E family), at 818,960 to 820,162
_0747
Psest_0748: Psest_0748 - RNA polymerase-binding protein DksA, at 820,172 to 820,576
_0748
Psest_0749: Psest_0749 - Transcriptional regulator, at 820,936 to 821,646
_0749
Position (kb) 818
819
820
821 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 818.551 kb on + strand, within Psest_0746 at 818.551 kb on + strand, within Psest_0746 at 818.552 kb on - strand, within Psest_0746 at 818.552 kb on - strand, within Psest_0746 at 818.552 kb on - strand, within Psest_0746 at 818.568 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.898 kb on + strand at 818.898 kb on + strand at 818.898 kb on + strand at 818.899 kb on - strand at 818.899 kb on - strand at 818.899 kb on - strand at 819.222 kb on + strand, within Psest_0747 at 819.223 kb on - strand, within Psest_0747 at 819.223 kb on - strand, within Psest_0747 at 819.348 kb on + strand, within Psest_0747 at 819.348 kb on + strand, within Psest_0747 at 819.348 kb on + strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.384 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 820.536 kb on + strand at 820.536 kb on + strand at 820.536 kb on + strand at 820.537 kb on - strand at 820.537 kb on - strand at 820.537 kb on - strand at 820.537 kb on - strand at 820.558 kb on + strand at 820.629 kb on + strand at 820.629 kb on + strand at 820.629 kb on + strand at 820.630 kb on - strand at 820.630 kb on - strand at 820.630 kb on - strand at 820.630 kb on - strand at 820.780 kb on + strand at 820.900 kb on - strand at 820.905 kb on - strand at 821.049 kb on + strand, within Psest_0749 at 821.050 kb on - strand, within Psest_0749
Per-strain Table
Position Strand Gene LocusTag Fraction Def Nalidixic 0.001 mg/ml remove 818,551 + Psest_0746 0.36 -0.5 818,551 + Psest_0746 0.36 +0.2 818,552 - Psest_0746 0.37 +0.3 818,552 - Psest_0746 0.37 -0.1 818,552 - Psest_0746 0.37 +0.9 818,568 + Psest_0746 0.39 +0.2 818,583 + Psest_0746 0.41 -1.8 818,583 + Psest_0746 0.41 -0.4 818,583 + Psest_0746 0.41 -0.1 818,583 + Psest_0746 0.41 +1.3 818,583 + Psest_0746 0.41 -0.1 818,583 + Psest_0746 0.41 -0.1 818,584 - Psest_0746 0.42 -0.1 818,584 - Psest_0746 0.42 -0.6 818,584 - Psest_0746 0.42 +0.1 818,584 - Psest_0746 0.42 -1.5 818,584 - Psest_0746 0.42 -1.2 818,584 - Psest_0746 0.42 +1.5 818,584 - Psest_0746 0.42 +1.2 818,898 + -2.1 818,898 + -0.8 818,898 + +0.2 818,899 - -0.5 818,899 - -1.0 818,899 - -0.6 819,222 + Psest_0747 0.22 +1.5 819,223 - Psest_0747 0.22 +0.5 819,223 - Psest_0747 0.22 +1.2 819,348 + Psest_0747 0.32 -1.2 819,348 + Psest_0747 0.32 -0.2 819,348 + Psest_0747 0.32 +1.6 819,349 - Psest_0747 0.32 +1.7 819,349 - Psest_0747 0.32 +0.0 819,349 - Psest_0747 0.32 -2.0 819,349 - Psest_0747 0.32 +0.2 819,384 + Psest_0747 0.35 +0.2 819,405 + Psest_0747 0.37 +0.2 819,405 + Psest_0747 0.37 +0.3 819,405 + Psest_0747 0.37 -0.1 819,405 + Psest_0747 0.37 +1.1 820,536 + +0.2 820,536 + +0.5 820,536 + +0.5 820,537 - +0.1 820,537 - +0.1 820,537 - -0.1 820,537 - -1.5 820,558 + -2.0 820,629 + +0.3 820,629 + -1.3 820,629 + -0.5 820,630 - -0.5 820,630 - -0.5 820,630 - -2.9 820,630 - -0.8 820,780 + -0.5 820,900 - +0.5 820,905 - +0.1 821,049 + Psest_0749 0.16 -0.7 821,050 - Psest_0749 0.16 +1.6
Or see this region's nucleotide sequence