Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4345

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
4,542,398	+		Psest_4343	0.43	+0.0
4,542,398	+		Psest_4343	0.43	+0.3
4,542,399	-		Psest_4343	0.44	-0.7
4,542,399	-		Psest_4343	0.44	+0.4
4,542,589	+				-0.8
4,542,589	+				-0.3
4,542,589	+				-0.4
4,542,589	+				+0.1
4,542,589	+				+0.2
4,542,589	+				+0.8
4,542,589	+				+0.0
4,542,589	+				-1.2
4,542,589	+				-0.7
4,542,589	+				+0.6
4,542,590	-				+0.6
4,542,590	-				+0.2
4,542,590	-				-0.1
4,542,638	-				-0.8
4,542,644	+				+0.3
4,542,644	+				-1.2
4,542,644	+				-1.0
4,542,644	+				+0.1
4,542,644	+				+0.4
4,542,645	-				-0.7
4,542,729	-				+0.7
4,542,776	+		Psest_4344	0.21	+0.2
4,542,807	+		Psest_4344	0.28	-0.1
4,542,807	+		Psest_4344	0.28	-0.2
4,542,807	+		Psest_4344	0.28	+0.2
4,542,807	+		Psest_4344	0.28	-0.2
4,542,807	+		Psest_4344	0.28	+0.3
4,542,808	-		Psest_4344	0.28	+0.8
4,542,808	-		Psest_4344	0.28	-0.6
4,542,808	-		Psest_4344	0.28	-0.7
4,542,808	-		Psest_4344	0.28	+0.2
4,542,808	-		Psest_4344	0.28	-0.2
4,542,808	-		Psest_4344	0.28	-0.4
4,542,808	-		Psest_4344	0.28	-1.9
4,542,808	-		Psest_4344	0.28	+0.6
4,542,808	-		Psest_4344	0.28	+0.1
4,542,810	+		Psest_4344	0.29	-0.0
4,542,810	+		Psest_4344	0.29	-0.4
4,542,810	+		Psest_4344	0.29	+0.5
4,542,810	+		Psest_4344	0.29	+0.2
4,542,811	-		Psest_4344	0.29	-1.7
4,542,811	-		Psest_4344	0.29	-1.0
4,542,811	-		Psest_4344	0.29	+0.1
4,542,891	+		Psest_4344	0.49	-0.2
4,542,891	+		Psest_4344	0.49	-0.0
4,542,891	+		Psest_4344	0.49	+0.5
4,542,891	+		Psest_4344	0.49	+0.4
4,542,891	+		Psest_4344	0.49	-0.2
4,542,891	+		Psest_4344	0.49	+0.2
4,542,891	+		Psest_4344	0.49	-0.6
4,542,891	+		Psest_4344	0.49	+0.2
4,542,891	+		Psest_4344	0.49	+1.2
4,542,892	-		Psest_4344	0.49	+0.3
4,542,892	-		Psest_4344	0.49	-0.2
4,542,892	-		Psest_4344	0.49	-0.1
4,542,892	-		Psest_4344	0.49	-0.8
4,542,892	-		Psest_4344	0.49	-1.2
4,542,892	-		Psest_4344	0.49	+1.3
4,542,892	-		Psest_4344	0.49	-0.1
4,542,892	-		Psest_4344	0.49	-0.5
4,542,892	-		Psest_4344	0.49	-1.1
4,542,895	+		Psest_4344	0.50	+1.2
4,542,895	+		Psest_4344	0.50	+0.7
4,542,896	-		Psest_4344	0.50	-0.5
4,542,896	-		Psest_4344	0.50	-0.6
4,542,896	-		Psest_4344	0.50	+0.4
4,542,896	-		Psest_4344	0.50	-1.5
4,542,939	+		Psest_4344	0.61	+0.1
4,542,939	+		Psest_4344	0.61	+0.4
4,542,939	+		Psest_4344	0.61	+0.1
4,542,939	+		Psest_4344	0.61	-0.6
4,542,939	+		Psest_4344	0.61	+0.4
4,542,939	+		Psest_4344	0.61	+0.1
4,542,939	+		Psest_4344	0.61	+0.4
4,542,939	+		Psest_4344	0.61	+0.1
4,542,940	-		Psest_4344	0.61	-0.4
4,542,940	-		Psest_4344	0.61	-0.8
4,542,940	-		Psest_4344	0.61	-3.4
4,543,115	+				+1.0
4,543,115	+				+1.5
4,543,115	+				+0.6
4,543,115	+				+0.8
4,543,115	+				+0.9
4,543,115	+				+0.5
4,543,115	+				+0.8
4,543,115	+				+1.3
4,543,116	-				-0.1
4,543,116	-				-0.8
4,543,116	-				+0.3
4,543,116	-				-0.6
4,543,139	+				+1.8
4,543,139	+				+1.1
4,543,141	+				+0.5
4,543,141	+				+1.0
4,543,141	+				+0.4
4,543,141	+				+0.8
4,543,141	+				+0.4
4,543,141	+				+0.8
4,543,142	-				+0.2
4,543,142	-				+0.1
4,543,142	-				-1.2
4,543,142	-				-1.0
4,543,142	-				-0.1
4,543,142	-				+1.4
4,543,142	-				+0.2
4,543,208	+				+1.0
4,543,257	+				+0.7
4,543,257	+				+0.1
4,543,257	+				+0.8
4,543,257	+				+2.0
4,543,257	+				+0.6
4,543,257	+				+1.4
4,543,257	+				+1.0
4,543,258	-				-0.8
4,543,258	-				+0.2
4,543,258	-				-0.3
4,543,258	-				+0.0
4,543,258	-				+0.3
4,543,258	-				-0.5
4,543,258	-				-0.4
4,543,258	-				+0.2
4,543,262	-				+0.5
4,543,262	-				-0.5
4,543,393	+				-0.4
4,543,393	+				+0.1
4,543,393	+				+0.3
4,543,394	-				-0.2
4,543,394	-				-1.9
4,543,394	-				-0.2
4,543,394	-				-0.3
4,543,394	-				-0.3
4,543,394	-				-0.6
4,543,395	+				+1.5
4,543,395	+				+0.6
4,543,395	+				-0.7
4,543,395	+				+0.1
4,543,396	-				+0.1
4,543,396	-				-0.4
4,543,396	-				-0.2
4,543,396	-				-0.8
4,543,396	-				-0.1
4,543,721	+		Psest_4345	0.17	-2.6
4,543,722	-		Psest_4345	0.17	+1.1
4,543,734	-		Psest_4345	0.18	-0.9
4,544,009	+		Psest_4345	0.30	-1.7
4,544,009	+		Psest_4345	0.30	-1.9
4,544,009	+		Psest_4345	0.30	-0.7
4,544,111	+		Psest_4345	0.34	-2.7
4,544,111	+		Psest_4345	0.34	-3.5
4,544,111	+		Psest_4345	0.34	-1.5
4,544,111	+		Psest_4345	0.34	-0.5
4,544,111	+		Psest_4345	0.34	-2.2
4,544,111	+		Psest_4345	0.34	-2.9
4,544,111	+		Psest_4345	0.34	-2.9
4,544,111	+		Psest_4345	0.34	-1.7
4,544,111	+		Psest_4345	0.34	-1.8
4,544,111	+		Psest_4345	0.34	-1.1
4,544,111	+		Psest_4345	0.34	-2.5
4,544,111	+		Psest_4345	0.34	-1.2
4,544,111	+		Psest_4345	0.34	-1.9
4,544,111	+		Psest_4345	0.34	-3.2
4,544,112	-		Psest_4345	0.35	-0.2
4,544,112	-		Psest_4345	0.35	-1.5
4,544,112	-		Psest_4345	0.35	-1.0
4,544,112	-		Psest_4345	0.35	+0.4
4,544,112	-		Psest_4345	0.35	-2.1
4,544,112	-		Psest_4345	0.35	-2.1
4,544,112	-		Psest_4345	0.35	-2.2
4,544,112	-		Psest_4345	0.35	-1.5
4,544,112	-		Psest_4345	0.35	-0.8
4,544,112	-		Psest_4345	0.35	-1.1
4,544,219	+		Psest_4345	0.39	-4.4
4,544,219	+		Psest_4345	0.39	-2.4
4,544,467	+		Psest_4345	0.50	-1.9
4,544,636	+		Psest_4345	0.58	-4.2
4,544,636	+		Psest_4345	0.58	-3.4
4,544,636	+		Psest_4345	0.58	-0.5
4,544,637	-		Psest_4345	0.58	-1.0
4,544,637	-		Psest_4345	0.58	-1.6
4,544,637	-		Psest_4345	0.58	-1.1
4,544,919	-		Psest_4345	0.70	-0.0
4,545,284	+		Psest_4345	0.86	-3.0
4,545,284	+		Psest_4345	0.86	-2.7
4,545,284	+		Psest_4345	0.86	-1.9
4,545,284	+		Psest_4345	0.86	-2.6
4,545,284	+		Psest_4345	0.86	-2.7
4,545,284	+		Psest_4345	0.86	-3.4
4,545,284	+		Psest_4345	0.86	-2.2
4,545,285	-		Psest_4345	0.86	-1.0
4,545,285	-		Psest_4345	0.86	-1.2
4,545,285	-		Psest_4345	0.86	-0.7
4,545,285	-		Psest_4345	0.86	-0.5
4,545,285	-		Psest_4345	0.86	+1.9
4,545,285	-		Psest_4345	0.86	-0.5
4,545,353	+		Psest_4345	0.89	-2.9
4,545,353	+		Psest_4345	0.89	-3.5
4,545,353	+		Psest_4345	0.89	-1.5
4,545,354	-		Psest_4345	0.89	-1.1
4,545,354	-		Psest_4345	0.89	-1.2
4,545,354	-		Psest_4345	0.89	-1.3
4,545,390	-				-0.5
4,545,412	-				-2.7
4,545,471	+				-1.9
4,545,471	+				-4.2
4,545,471	+				-3.7
4,545,471	+				-1.4
4,545,472	-				-0.6
4,545,542	+				-1.9
4,545,542	+				-3.8
4,545,542	+				-0.9
4,545,543	-				-0.0
4,545,543	-				-0.9
4,545,543	-				-1.3
4,545,566	+				+1.3
4,545,566	+				+0.3
4,545,566	+				-0.3
4,545,566	+				+0.5
4,545,566	+				-0.4
4,545,566	+				+0.8
4,545,566	+				-0.1
4,545,566	+				-0.2
4,545,566	+				-0.1
4,545,566	+				+0.2
4,545,566	+				-0.3
4,545,566	+				+2.5
4,545,566	+				-1.2
4,545,566	+				+2.3
4,545,567	-				-0.1
4,545,567	-				-1.9
4,545,567	-				-0.1
4,545,567	-				-0.8
4,545,567	-				+0.1
4,545,567	-				-0.2
4,545,567	-				-1.7
4,545,567	-				+0.0
4,545,567	-				+0.7
4,545,567	-				-1.7
4,545,567	-				-1.0
4,545,567	-				-0.5
4,545,567	-				-1.3
4,545,568	+				-0.7
4,545,568	+				+1.4
4,545,568	+				-1.7
4,545,568	+				-0.7
4,545,568	+				+0.3
4,545,568	+				+0.1
4,545,568	+				-1.8
4,545,568	+				-1.3
4,545,568	+				+0.1
4,545,568	+				-0.3
4,545,568	+				+1.3
4,545,569	-				-0.8
4,545,569	-				-1.7
4,545,569	-				-1.3
4,545,569	-				+0.1
4,545,569	-				-2.5
4,545,569	-				-0.3
4,545,569	-				+0.1
4,545,569	-				+1.1
4,545,569	-				+0.1
4,545,569	-				-0.8
4,545,569	-				-2.0
4,545,569	-				-0.7
4,545,569	-				-1.3
4,545,569	-				+0.4
4,545,569	-				+0.1
4,545,725	-		Psest_4346	0.27	+0.8
4,545,725	-		Psest_4346	0.27	+0.2
4,545,725	-		Psest_4346	0.27	-0.9
4,545,725	-		Psest_4346	0.27	+0.8
4,545,913	+		Psest_4346	0.66	+0.3
4,545,914	-		Psest_4346	0.67	+0.3
4,545,914	-		Psest_4346	0.67	-0.2
4,545,934	+		Psest_4346	0.71	+0.6
4,545,934	+		Psest_4346	0.71	+0.1
4,545,934	+		Psest_4346	0.71	+0.1
4,545,934	+		Psest_4346	0.71	-1.5
4,545,934	+		Psest_4346	0.71	+1.3
4,545,935	-		Psest_4346	0.71	-1.5
4,546,004	+		Psest_4346	0.86	+0.1
4,546,004	+		Psest_4346	0.86	+0.3
4,546,004	+		Psest_4346	0.86	-0.2
4,546,005	-		Psest_4346	0.86	-0.9
4,546,047	-				-3.1
4,546,134	+				+0.7
4,546,134	+				-0.1
4,546,134	+				+1.7
4,546,134	+				-1.3
4,546,134	+				+1.2
4,546,134	+				-2.4
4,546,134	+				-0.1
4,546,135	-				-1.0
4,546,135	-				-0.4
4,546,135	-				-0.1
4,546,135	-				-0.2
4,546,138	+				-0.4
4,546,138	+				-0.7
4,546,138	+				-0.3
4,546,138	+				+0.0
4,546,138	+				+0.7
4,546,138	+				-0.8
4,546,138	+				+0.3
4,546,138	+				+0.2
4,546,138	+				-0.8
4,546,139	-				-0.7
4,546,139	-				-0.4
4,546,139	-				-0.1
4,546,139	-				-0.5
4,546,139	-				+0.6
4,546,139	-				-0.7
4,546,139	-				+0.3
4,546,139	-				-3.1
4,546,139	-				-2.2
4,546,139	-				-1.3
4,546,254	-				-1.2
4,546,454	+		Psest_4347	0.13	-2.5
4,546,454	+		Psest_4347	0.13	-1.5
4,546,454	+		Psest_4347	0.13	-1.5
4,546,454	+		Psest_4347	0.13	-0.1
4,546,454	+		Psest_4347	0.13	-0.1
4,546,454	+		Psest_4347	0.13	-0.6
4,546,454	+		Psest_4347	0.13	-1.9
4,546,455	-		Psest_4347	0.13	-1.4
4,546,455	-		Psest_4347	0.13	-2.5
4,546,455	-		Psest_4347	0.13	-1.3
4,546,455	-		Psest_4347	0.13	+0.4
4,546,455	-		Psest_4347	0.13	-1.1
4,546,455	-		Psest_4347	0.13	-1.7