Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3901

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
4,067,980	+		Psest_3900	0.12	+2.4
4,067,980	+		Psest_3900	0.12	-0.1
4,067,980	+		Psest_3900	0.12	+0.9
4,067,980	+		Psest_3900	0.12	+0.0
4,067,980	+		Psest_3900	0.12	-0.0
4,067,980	+		Psest_3900	0.12	-0.6
4,067,980	+		Psest_3900	0.12	+0.8
4,067,981	-		Psest_3900	0.12	+0.2
4,067,981	-		Psest_3900	0.12	-0.4
4,067,981	-				+0.3
4,068,043	+		Psest_3900	0.18	+0.7
4,068,043	+		Psest_3900	0.18	-0.1
4,068,043	+		Psest_3900	0.18	+1.9
4,068,043	+		Psest_3900	0.18	+0.8
4,068,044	-		Psest_3900	0.18	-0.0
4,068,044	-		Psest_3900	0.18	+0.6
4,068,044	-		Psest_3900	0.18	+0.9
4,068,103	-		Psest_3900	0.23	+0.7
4,068,104	+		Psest_3900	0.23	-0.4
4,068,104	+		Psest_3900	0.23	-0.7
4,068,104	+		Psest_3900	0.23	+0.5
4,068,104	+		Psest_3900	0.23	+0.3
4,068,105	-		Psest_3900	0.23	+0.3
4,068,105	-		Psest_3900	0.23	-0.9
4,068,105	-		Psest_3900	0.23	+1.3
4,068,105	-		Psest_3900	0.23	-0.5
4,068,105	-		Psest_3900	0.23	-0.3
4,068,229	+		Psest_3900	0.35	+0.2
4,068,241	+		Psest_3900	0.36	+0.3
4,068,241	+		Psest_3900	0.36	+0.1
4,068,241	+		Psest_3900	0.36	+0.2
4,068,242	-		Psest_3900	0.36	-0.8
4,068,242	-		Psest_3900	0.36	-0.5
4,068,484	+		Psest_3900	0.58	+0.4
4,068,484	+		Psest_3900	0.58	+0.2
4,068,484	+		Psest_3900	0.58	+0.9
4,068,484	+		Psest_3900	0.58	+0.8
4,068,485	-		Psest_3900	0.58	+2.1
4,068,490	+		Psest_3900	0.59	-0.0
4,068,490	+		Psest_3900	0.59	+1.1
4,068,491	-		Psest_3900	0.59	-1.5
4,068,491	-		Psest_3900	0.59	+0.0
4,068,491	-		Psest_3900	0.59	+2.9
4,068,510	+		Psest_3900	0.61	+0.8
4,068,550	+		Psest_3900	0.64	+0.1
4,068,614	+		Psest_3900	0.70	+0.7
4,068,614	+		Psest_3900	0.70	+0.4
4,068,614	+		Psest_3900	0.70	-0.3
4,068,614	+		Psest_3900	0.70	+0.3
4,068,614	+		Psest_3900	0.70	+0.5
4,068,614	+		Psest_3900	0.70	+0.1
4,068,614	+		Psest_3900	0.70	-0.7
4,068,614	+				+1.9
4,068,615	-		Psest_3900	0.70	+0.7
4,068,615	-		Psest_3900	0.70	+1.1
4,068,615	-		Psest_3900	0.70	+0.3
4,068,615	-		Psest_3900	0.70	+0.3
4,068,615	-		Psest_3900	0.70	+0.5
4,068,857	-				-2.7
4,069,002	-				+0.7
4,069,080	-				+0.6
4,069,080	-				+0.8
4,069,080	-				-1.3
4,069,080	-				+0.4
4,069,088	+				+0.3
4,069,115	+				+0.0
4,069,198	+		Psest_3901	0.12	-0.9
4,069,283	+		Psest_3901	0.15	-1.3
4,069,286	+		Psest_3901	0.15	-0.1
4,069,286	+		Psest_3901	0.15	-0.7
4,069,286	+		Psest_3901	0.15	+0.5
4,069,286	+		Psest_3901	0.15	+0.5
4,069,287	-		Psest_3901	0.15	+1.9
4,069,287	-		Psest_3901	0.15	+0.9
4,069,287	-		Psest_3901	0.15	+0.8
4,069,287	-		Psest_3901	0.15	+0.6
4,069,287	-		Psest_3901	0.15	+0.3
4,069,287	-		Psest_3901	0.15	+0.3
4,069,287	-		Psest_3901	0.15	+1.2
4,069,287	-		Psest_3901	0.15	+0.1
4,069,385	+		Psest_3901	0.19	+0.4
4,069,385	+		Psest_3901	0.19	-2.0
4,069,385	+		Psest_3901	0.19	+0.8
4,069,385	+		Psest_3901	0.19	+0.5
4,069,385	+		Psest_3901	0.19	+0.3
4,069,386	-		Psest_3901	0.20	-1.7
4,069,386	-		Psest_3901	0.20	-0.4
4,069,550	+		Psest_3901	0.26	-0.4
4,069,550	+		Psest_3901	0.26	-0.7
4,069,662	-		Psest_3901	0.31	-0.7
4,069,662	-		Psest_3901	0.31	+0.3
4,070,000	+		Psest_3901	0.45	+0.3
4,070,000	+		Psest_3901	0.45	+0.3
4,070,000	+		Psest_3901	0.45	+0.3
4,070,000	+		Psest_3901	0.45	+0.8
4,070,001	-		Psest_3901	0.45	-0.7
4,070,001	-		Psest_3901	0.45	-0.7
4,070,001	-		Psest_3901	0.45	+2.1
4,070,001	-		Psest_3901	0.45	-0.1
4,070,001	-		Psest_3901	0.45	-0.3
4,070,001	-		Psest_3901	0.45	+0.3
4,070,001	-		Psest_3901	0.45	+0.6
4,070,001	-		Psest_3901	0.45	+0.3
4,070,001	-		Psest_3901	0.45	+0.7
4,070,313	-		Psest_3901	0.59	-0.7
4,070,402	+		Psest_3901	0.62	-0.1
4,070,402	+		Psest_3901	0.62	-0.3
4,070,402	+		Psest_3901	0.62	+0.3
4,070,402	+		Psest_3901	0.62	-0.3
4,070,402	+		Psest_3901	0.62	+0.6
4,070,403	-		Psest_3901	0.62	+2.5
4,070,403	-		Psest_3901	0.62	+0.3
4,070,403	-		Psest_3901	0.62	+0.3
4,070,403	-		Psest_3901	0.62	-0.4
4,070,403	-		Psest_3901	0.62	+2.1
4,070,403	-		Psest_3901	0.62	-1.0
4,070,534	+		Psest_3901	0.68	-0.6
4,070,534	+		Psest_3901	0.68	+1.3
4,070,534	+		Psest_3901	0.68	-0.7
4,070,534	+		Psest_3901	0.68	+0.3
4,070,534	+		Psest_3901	0.68	-0.7
4,070,534	+		Psest_3901	0.68	-0.4
4,070,534	+		Psest_3901	0.68	+0.1
4,070,534	+		Psest_3901	0.68	+0.5
4,070,534	+		Psest_3901	0.68	+0.3
4,070,534	+		Psest_3901	0.68	-0.7
4,070,534	+		Psest_3901	0.68	-1.7
4,070,534	+		Psest_3901	0.68	+0.3
4,070,534	+		Psest_3901	0.68	-1.3
4,070,534	+		Psest_3901	0.68	-0.7
4,070,534	+		Psest_3901	0.68	-0.4
4,070,535	-		Psest_3901	0.68	+1.1
4,070,535	-		Psest_3901	0.68	+1.2
4,070,535	-		Psest_3901	0.68	-0.3
4,070,535	-		Psest_3901	0.68	+1.3
4,070,535	-		Psest_3901	0.68	+0.5
4,070,535	-		Psest_3901	0.68	-0.4
4,070,535	-		Psest_3901	0.68	-0.7
4,070,535	-		Psest_3901	0.68	-0.3
4,070,535	-		Psest_3901	0.68	+0.4
4,070,535	-		Psest_3901	0.68	-0.1
4,070,535	-		Psest_3901	0.68	+0.1
4,070,535	-		Psest_3901	0.68	+3.3
4,070,535	-		Psest_3901	0.68	-0.7
4,070,535	-		Psest_3901	0.68	+0.3
4,070,536	+		Psest_3901	0.68	-1.3
4,070,536	+		Psest_3901	0.68	-0.7
4,070,536	+		Psest_3901	0.68	+1.3
4,070,536	+		Psest_3901	0.68	+0.3
4,070,537	-		Psest_3901	0.68	+1.2
4,070,795	+		Psest_3901	0.79	+0.7
4,070,795	+		Psest_3901	0.79	+1.9
4,070,796	-		Psest_3901	0.79	-1.3
4,070,796	-		Psest_3901	0.79	-1.0
4,070,796	-		Psest_3901	0.79	+0.6
4,070,864	+		Psest_3901	0.82	+0.3
4,070,865	-		Psest_3901	0.82	+0.3
4,070,865	-		Psest_3901	0.82	+0.5
4,070,957	+		Psest_3901	0.86	-1.7
4,070,958	-		Psest_3901	0.86	-0.7
4,071,419	+				-1.7
4,071,419	+				-0.1
4,071,419	+				-0.0
4,071,419	+				+1.3
4,071,420	-				+1.0
4,071,420	-				+0.7
4,071,420	-				-1.3
4,071,420	-				+0.8
4,071,420	-				+1.0
4,071,508	+		Psest_3902	0.10	+0.3
4,071,508	+		Psest_3902	0.10	-0.4
4,071,508	+		Psest_3902	0.10	-0.9
4,071,509	-		Psest_3902	0.10	+0.1
4,071,868	+		Psest_3902	0.85	-0.7
4,071,907	+				-1.3
4,071,907	+				+1.6
4,071,907	+				-1.3
4,071,907	+				+0.9
4,071,907	+				+0.3
4,071,908	-				-0.3
4,071,908	-				-0.4
4,071,908	-				+2.0
4,071,908	-				-1.0
4,071,908	-				-0.6
4,071,910	+				+0.7
4,071,910	+				+0.3
4,071,910	+				-0.3
4,071,910	+				+0.6
4,071,910	+				+1.3
4,071,911	-				+0.1
4,071,911	-				-2.0
4,071,911	-				+0.5
4,071,911	-				+0.9
4,071,911	-				-0.7
4,071,956	+				+1.9
4,072,035	+				+0.3
4,072,035	+				+0.3
4,072,035	+				-0.7
4,072,074	+		Psest_3903	0.12	-0.3
4,072,089	+		Psest_3903	0.14	+0.3
4,072,089	+		Psest_3903	0.14	-0.7
4,072,089	+		Psest_3903	0.14	-0.7
4,072,089	+		Psest_3903	0.14	+0.3
4,072,089	+		Psest_3903	0.14	+0.6
4,072,090	-		Psest_3903	0.14	-1.2
4,072,090	-		Psest_3903	0.14	-1.3
4,072,090	-		Psest_3903	0.14	-1.3
4,072,090	-		Psest_3903	0.14	-0.3
4,072,090	-		Psest_3903	0.14	+0.5
4,072,090	-		Psest_3903	0.14	-0.2
4,072,090	-		Psest_3903	0.14	+0.3
4,072,090	-		Psest_3903	0.14	-0.1
4,072,090	-		Psest_3903	0.14	+0.0