Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3125
Experiment: Def Nalidixic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Def Nalidixic 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,300,458 | + | Psest_3123 | 0.79 | -2.1 | |
| 3,300,458 | + | Psest_3123 | 0.79 | -1.0 | |
| 3,300,458 | + | Psest_3123 | 0.79 | -1.5 | |
| 3,300,459 | - | Psest_3123 | 0.79 | -1.3 | |
| 3,300,550 | + | Psest_3123 | 0.88 | -1.5 | |
| 3,301,016 | + | Psest_3124 | 0.51 | +0.6 | |
| 3,301,016 | + | Psest_3124 | 0.51 | +0.8 | |
| 3,302,943 | - | +0.8 | |||
| 3,302,943 | - | +1.2 | |||
| 3,302,943 | - | -0.5 |
Or see this region's nucleotide sequence