Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2883

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
3,073,431	+		Psest_2881	0.90	+0.7
3,073,431	+		Psest_2881	0.90	+0.9
3,073,431	+		Psest_2881	0.90	+0.4
3,073,431	+		Psest_2881	0.90	+0.0
3,073,432	-				+0.0
3,073,432	-				+0.1
3,073,432	-				-0.4
3,073,469	-				+0.2
3,073,484	-				+0.4
3,073,484	-				+0.2
3,073,484	-				-0.8
3,073,523	+				+0.4
3,073,523	+				+0.1
3,073,524	-				+0.1
3,073,539	+				+0.2
3,073,540	-				-0.5
3,073,540	-				-0.5
3,073,553	-				+0.8
3,073,591	+				+0.5
3,073,737	+				+0.2
3,073,737	+				+0.2
3,073,738	-				+0.8
3,073,738	-				-1.2
3,073,738	-				-1.4
3,073,738	-				+2.2
3,073,738	-				+0.5
3,073,743	+				-0.6
3,073,743	+				-2.1
3,073,744	-				-1.6
3,073,761	+		Psest_2882	0.15	-0.1
3,073,761	+		Psest_2882	0.15	-0.8
3,073,761	+		Psest_2882	0.15	+0.3
3,073,761	+		Psest_2882	0.15	+0.4
3,073,761	+		Psest_2882	0.15	-1.4
3,073,761	+		Psest_2882	0.15	-0.7
3,073,762	-		Psest_2882	0.16	+0.7
3,073,762	-		Psest_2882	0.16	+0.0
3,073,762	-		Psest_2882	0.16	+0.7
3,073,762	-		Psest_2882	0.16	-2.1
3,073,762	-		Psest_2882	0.16	-0.4
3,073,806	+		Psest_2882	0.35	+0.2
3,073,806	+		Psest_2882	0.35	-1.1
3,073,806	+		Psest_2882	0.35	-0.1
3,073,807	-		Psest_2882	0.35	-1.3
3,074,162	+				+0.3
3,074,163	-				-0.3
3,074,196	-				+0.2
3,074,279	+				+0.3
3,074,280	-				+1.2
3,074,327	+				-0.6
3,074,327	+				+0.3
3,074,327	+				+0.2
3,074,327	+				+1.0
3,074,328	-				-0.4
3,074,387	+				-0.5
3,074,500	+				-0.1
3,074,500	+				-0.8
3,074,500	+				-1.9
3,074,500	+				-1.0
3,074,500	+				+0.7
3,074,500	+				+0.2
3,074,501	-				-2.7
3,074,501	-				-0.3
3,074,501	-				+0.7
3,074,501	-				+0.4
3,074,501	-				+0.3
3,074,501	-				-0.8
3,074,501	-				-0.6
3,074,501	-				-0.1
3,074,504	+		Psest_2883	0.10	-1.1
3,074,504	+		Psest_2883	0.10	-0.2
3,074,504	+		Psest_2883	0.10	-0.8
3,074,505	-		Psest_2883	0.10	+0.2
3,074,505	-		Psest_2883	0.10	+0.6
3,074,536	+		Psest_2883	0.12	+0.2
3,074,537	-		Psest_2883	0.12	-1.1
3,074,537	-		Psest_2883	0.12	+0.6
3,074,537	-		Psest_2883	0.12	-1.6
3,074,537	-		Psest_2883	0.12	-0.8
3,074,537	-		Psest_2883	0.12	-1.4
3,074,537	-		Psest_2883	0.12	-1.2
3,074,620	+		Psest_2883	0.18	+0.5
3,074,620	+		Psest_2883	0.18	+1.5
3,074,620	+		Psest_2883	0.18	+0.1
3,074,621	-		Psest_2883	0.18	-1.9
3,074,623	+		Psest_2883	0.18	+1.0
3,074,623	+		Psest_2883	0.18	-1.7
3,074,624	-		Psest_2883	0.18	-1.5
3,074,624	-		Psest_2883	0.18	-0.3
3,074,624	-		Psest_2883	0.18	+0.2
3,074,624	-		Psest_2883	0.18	-0.6
3,074,624	-		Psest_2883	0.18	-0.6
3,074,624	-		Psest_2883	0.18	-1.1
3,074,629	+		Psest_2883	0.18	-0.6
3,074,629	+		Psest_2883	0.18	+0.8
3,074,630	-		Psest_2883	0.18	-0.4
3,074,630	-		Psest_2883	0.18	-1.6
3,074,791	+		Psest_2883	0.29	-0.4
3,074,791	+		Psest_2883	0.29	-0.4
3,074,791	+		Psest_2883	0.29	-0.5
3,074,791	+		Psest_2883	0.29	-1.4
3,074,791	+		Psest_2883	0.29	-1.1
3,074,791	+		Psest_2883	0.29	+1.2
3,074,792	-		Psest_2883	0.29	+0.6
3,074,792	-		Psest_2883	0.29	-0.6
3,074,792	-		Psest_2883	0.29	-1.0
3,074,951	+		Psest_2883	0.39	-0.8
3,074,951	+		Psest_2883	0.39	+1.2
3,074,951	+		Psest_2883	0.39	+2.4
3,074,951	+		Psest_2883	0.39	+0.1
3,074,952	-		Psest_2883	0.39	-1.1
3,074,952	-		Psest_2883	0.39	+1.8
3,075,028	+		Psest_2883	0.44	-1.0
3,075,028	+		Psest_2883	0.44	-0.4
3,075,028	+		Psest_2883	0.44	-1.4
3,075,028	+		Psest_2883	0.44	+0.8
3,075,029	-		Psest_2883	0.44	-2.0
3,075,029	-		Psest_2883	0.44	-0.6
3,075,029	-		Psest_2883	0.44	+0.6
3,075,029	-		Psest_2883	0.44	-0.3
3,075,029	-		Psest_2883	0.44	-0.7
3,075,029	-		Psest_2883	0.44	+0.4
3,075,029	-		Psest_2883	0.44	-1.2
3,075,055	+		Psest_2883	0.46	+0.2
3,075,055	+		Psest_2883	0.46	+0.4
3,075,055	+		Psest_2883	0.46	-1.1
3,075,056	-		Psest_2883	0.46	-0.9
3,075,056	-		Psest_2883	0.46	+0.0
3,075,056	-		Psest_2883	0.46	-0.3
3,075,070	+		Psest_2883	0.47	-2.0
3,075,070	+		Psest_2883	0.47	+0.2
3,075,070	+		Psest_2883	0.47	+0.0
3,075,071	-		Psest_2883	0.47	-1.8
3,075,071	-		Psest_2883	0.47	-0.2
3,075,071	-		Psest_2883	0.47	+0.5
3,075,071	-		Psest_2883	0.47	-0.5
3,075,182	-		Psest_2883	0.54	+0.2
3,075,226	+		Psest_2883	0.57	+1.9
3,075,226	+		Psest_2883	0.57	-1.2
3,075,227	-		Psest_2883	0.57	+0.7
3,075,227	-		Psest_2883	0.57	+1.0
3,075,232	+		Psest_2883	0.57	-0.9
3,075,232	+		Psest_2883	0.57	-0.2
3,075,232	+		Psest_2883	0.57	-0.1
3,075,232	+		Psest_2883	0.57	-0.5
3,075,232	+		Psest_2883	0.57	-1.2
3,075,233	-		Psest_2883	0.57	-0.7
3,075,233	-		Psest_2883	0.57	+0.0
3,075,233	-		Psest_2883	0.57	-0.3
3,075,233	-		Psest_2883	0.57	-0.1
3,075,233	-		Psest_2883	0.57	-0.8
3,075,425	-		Psest_2883	0.70	+0.2
3,075,652	+		Psest_2883	0.85	-0.5
3,075,652	+		Psest_2883	0.85	-0.4
3,075,652	+		Psest_2883	0.85	-0.0
3,075,652	+		Psest_2883	0.85	+0.2
3,075,652	+		Psest_2883	0.85	-0.6
3,075,653	-		Psest_2883	0.85	-0.8
3,075,653	-		Psest_2883	0.85	-1.7
3,075,653	-		Psest_2883	0.85	+0.6
3,075,653	-		Psest_2883	0.85	+0.5
3,075,818	+				-0.7
3,075,874	+				+0.3
3,075,874	+				-0.0
3,075,875	-				+0.2
3,075,875	-				+0.0
3,075,875	-				-0.8
3,075,975	+				-1.0
3,075,975	+				+0.6
3,076,228	+		Psest_2884	0.17	+0.1
3,076,228	+		Psest_2884	0.17	-1.5
3,076,241	+		Psest_2884	0.17	+0.2
3,076,477	+		Psest_2884	0.30	+1.2
3,076,477	+		Psest_2884	0.30	-0.6
3,076,477	+				+0.2
3,076,478	-		Psest_2884	0.30	-0.8
3,076,478	-		Psest_2884	0.30	-1.1
3,076,478	-		Psest_2884	0.30	-0.8
3,076,685	+		Psest_2884	0.41	-0.4
3,076,686	-		Psest_2884	0.41	-0.9