Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2547
Experiment: Def Nalidixic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Def Nalidixic 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,724,694 | + | Psest_2545 | 0.23 | +1.9 | |
2,724,694 | + | Psest_2545 | 0.23 | -0.7 | |
2,724,695 | - | Psest_2545 | 0.23 | -0.3 | |
2,724,789 | - | Psest_2545 | 0.39 | +0.1 | |
2,724,848 | - | Psest_2545 | 0.49 | +0.6 | |
2,724,848 | - | Psest_2545 | 0.49 | -1.2 | |
2,725,096 | - | +0.3 | |||
2,725,159 | - | +0.1 | |||
2,725,250 | + | +0.0 | |||
2,725,250 | + | -0.4 | |||
2,725,257 | + | -0.0 | |||
2,725,257 | + | -0.6 | |||
2,725,258 | - | -2.5 | |||
2,725,258 | - | +0.3 | |||
2,725,258 | - | -0.3 | |||
2,727,692 | + | +0.2 | |||
2,727,692 | + | -0.8 | |||
2,727,693 | - | -0.2 | |||
2,727,693 | - | +0.4 | |||
2,727,693 | - | -0.4 | |||
2,727,693 | - | -0.2 |
Or see this region's nucleotide sequence