Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2380

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
2,530,579	-		Psest_2379	0.60	+0.1
2,531,037	+		Psest_2379	0.78	-1.0
2,531,038	-		Psest_2379	0.78	-3.3
2,531,209	+		Psest_2379	0.84	-1.4
2,531,467	-				-1.9
2,531,467	-				-0.1
2,531,467	-				-2.8
2,531,467	-				-2.7
2,531,662	+				-1.2
2,531,884	+		Psest_2380	0.26	-2.2
2,531,884	+		Psest_2380	0.26	-1.7
2,531,884	+		Psest_2380	0.26	-1.8
2,531,932	+		Psest_2380	0.30	-3.9
2,531,932	+		Psest_2380	0.30	+0.2
2,531,932	+		Psest_2380	0.30	-2.5
2,531,932	+		Psest_2380	0.30	-2.6
2,531,932	+		Psest_2380	0.30	-0.2
2,531,932	+		Psest_2380	0.30	-1.8
2,531,932	+		Psest_2380	0.30	-1.2
2,531,932	+		Psest_2380	0.30	-3.3
2,531,932	+		Psest_2380	0.30	-0.2
2,531,933	-		Psest_2380	0.31	-0.2
2,531,933	-		Psest_2380	0.31	-1.2
2,531,933	-		Psest_2380	0.31	+1.9
2,531,933	-		Psest_2380	0.31	+0.1
2,531,933	-		Psest_2380	0.31	+2.1
2,531,933	-		Psest_2380	0.31	+0.2
2,531,935	+		Psest_2380	0.31	-1.7
2,531,936	-		Psest_2380	0.31	-0.2
2,532,003	+		Psest_2380	0.37	-1.8
2,532,022	+		Psest_2380	0.38	-2.7
2,532,022	+		Psest_2380	0.38	-2.7
2,532,022	+		Psest_2380	0.38	-1.0
2,532,022	+		Psest_2380	0.38	-2.2
2,532,022	+		Psest_2380	0.38	-1.8
2,532,023	-		Psest_2380	0.38	+0.8
2,532,023	-		Psest_2380	0.38	-1.2
2,532,056	-		Psest_2380	0.41	+0.6
2,532,163	-		Psest_2380	0.50	-1.0
2,532,184	+		Psest_2380	0.52	-2.4
2,532,185	-		Psest_2380	0.52	-0.1
2,532,185	-		Psest_2380	0.52	-0.7
2,532,185	-		Psest_2380	0.52	-1.1
2,532,185	-		Psest_2380	0.52	-0.4
2,532,200	-		Psest_2380	0.54	-1.4
2,532,202	+		Psest_2380	0.54	-1.0
2,532,202	+		Psest_2380	0.54	-1.9
2,532,203	-		Psest_2380	0.54	-1.1
2,532,203	-		Psest_2380	0.54	-0.5
2,532,203	-		Psest_2380	0.54	-1.2
2,532,203	-		Psest_2380	0.54	+0.3
2,532,203	-		Psest_2380	0.54	-1.5
2,532,208	+		Psest_2380	0.54	-2.6
2,532,208	+		Psest_2380	0.54	-1.2
2,532,208	+		Psest_2380	0.54	-0.2
2,532,208	+		Psest_2380	0.54	-0.7
2,532,208	+		Psest_2380	0.54	-2.8
2,532,208	+		Psest_2380	0.54	-1.4
2,532,208	+		Psest_2380	0.54	-1.4
2,532,208	+		Psest_2380	0.54	-0.5
2,532,208	+		Psest_2380	0.54	-2.8
2,532,208	+		Psest_2380	0.54	-1.1
2,532,208	+		Psest_2380	0.54	-2.4
2,532,208	+		Psest_2380	0.54	-2.1
2,532,208	+		Psest_2380	0.54	-0.4
2,532,208	+		Psest_2380	0.54	-2.9
2,532,208	+		Psest_2380	0.54	-2.1
2,532,208	+		Psest_2380	0.54	-2.6
2,532,208	+		Psest_2380	0.54	+0.3
2,532,208	+		Psest_2380	0.54	-2.8
2,532,208	+		Psest_2380	0.54	-1.6
2,532,208	+		Psest_2380	0.54	-0.9
2,532,208	+		Psest_2380	0.54	+0.6
2,532,208	+		Psest_2380	0.54	-2.1
2,532,208	+		Psest_2380	0.54	-2.3
2,532,208	+		Psest_2380	0.54	-1.2
2,532,208	+		Psest_2380	0.54	-0.8
2,532,208	+		Psest_2380	0.54	-1.1
2,532,208	+		Psest_2380	0.54	-1.8
2,532,208	+		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	-0.9
2,532,209	-		Psest_2380	0.54	-1.3
2,532,209	-		Psest_2380	0.54	-1.8
2,532,209	-		Psest_2380	0.54	+0.3
2,532,209	-		Psest_2380	0.54	-0.2
2,532,209	-		Psest_2380	0.54	-1.0
2,532,209	-		Psest_2380	0.54	-1.1
2,532,209	-		Psest_2380	0.54	+1.1
2,532,209	-		Psest_2380	0.54	+1.3
2,532,209	-		Psest_2380	0.54	-2.9
2,532,209	-		Psest_2380	0.54	+0.0
2,532,209	-		Psest_2380	0.54	+0.3
2,532,209	-		Psest_2380	0.54	-1.5
2,532,209	-		Psest_2380	0.54	-1.9
2,532,209	-		Psest_2380	0.54	+1.1
2,532,209	-		Psest_2380	0.54	-2.2
2,532,209	-		Psest_2380	0.54	-0.3
2,532,209	-		Psest_2380	0.54	-2.0
2,532,209	-		Psest_2380	0.54	-0.3
2,532,209	-		Psest_2380	0.54	-0.6
2,532,209	-		Psest_2380	0.54	-0.5
2,532,209	-		Psest_2380	0.54	-0.8
2,532,209	-		Psest_2380	0.54	+0.9
2,532,209	-		Psest_2380	0.54	-0.2
2,532,209	-		Psest_2380	0.54	-1.0
2,532,209	-		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	-0.6
2,532,209	-		Psest_2380	0.54	-1.8
2,532,209	-		Psest_2380	0.54	-0.4
2,532,209	-		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	-0.8
2,532,209	-		Psest_2380	0.54	-1.9
2,532,209	-		Psest_2380	0.54	-1.8
2,532,209	-		Psest_2380	0.54	+1.0
2,532,209	-		Psest_2380	0.54	-0.2
2,532,209	-		Psest_2380	0.54	-1.5
2,532,209	-		Psest_2380	0.54	-0.5
2,532,212	+		Psest_2380	0.55	-1.2
2,532,212	+		Psest_2380	0.55	-2.7
2,532,213	-		Psest_2380	0.55	+1.3
2,532,213	-		Psest_2380	0.55	-3.1
2,532,213	-		Psest_2380	0.55	-0.2
2,532,522	-		Psest_2380	0.81	-1.8
2,532,522	-		Psest_2380	0.81	-1.7
2,532,568	+		Psest_2380	0.85	+0.8
2,532,605	-		Psest_2380	0.88	-1.0
2,532,717	+				-0.7
2,532,718	-				-1.5
2,532,793	+				-0.1
2,532,809	+				-1.5
2,532,810	-				-0.2
2,532,835	+				-0.5
2,532,835	+				-1.8
2,532,835	+				-2.2
2,532,836	-				-2.5
2,532,836	-				-0.2
2,532,839	+				-1.5
2,532,869	+				+0.3
2,532,992	+				-0.4
2,532,992	+				-0.6
2,532,992	+				+0.5
2,532,993	-				+0.3
2,532,993	-				-1.6
2,533,026	+				+1.0
2,533,026	+				-0.2
2,533,026	+				-0.5
2,533,027	-				+0.8
2,533,027	-				-0.2
2,533,069	-				+0.7
2,533,069	-				+1.5
2,533,069	-				+0.0
2,533,069	-				+0.9
2,533,234	+		Psest_2381	0.14	+1.1
2,533,303	-		Psest_2381	0.20	+1.1
2,533,527	+		Psest_2381	0.38	+0.0
2,533,527	+		Psest_2381	0.38	+0.0
2,533,527	+		Psest_2381	0.38	-0.1
2,533,527	+		Psest_2381	0.38	+2.7
2,533,527	+		Psest_2381	0.38	+1.3
2,533,527	+		Psest_2381	0.38	-0.7
2,533,527	+		Psest_2381	0.38	+0.7
2,533,528	-		Psest_2381	0.38	+1.0
2,533,528	-		Psest_2381	0.38	+0.5
2,533,557	+		Psest_2381	0.41	-0.3
2,533,611	+		Psest_2381	0.45	+0.0
2,533,643	-		Psest_2381	0.48	+0.7
2,533,645	+		Psest_2381	0.48	+0.9
2,533,646	-		Psest_2381	0.48	-0.0
2,533,646	-		Psest_2381	0.48	+0.8
2,533,705	-		Psest_2381	0.53	+1.0
2,533,705	-		Psest_2381	0.53	-0.6
2,533,705	-		Psest_2381	0.53	+0.3