Experiment: Def Nalidixic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0212 and Psest_0213 overlap by 4 nucleotides Psest_0213 and Psest_0214 are separated by 70 nucleotides
Psest_0212: Psest_0212 - exodeoxyribonuclease V, gamma subunit, at 213,329 to 216,628
_0212
Psest_0213: Psest_0213 - exodeoxyribonuclease V, beta subunit, at 216,625 to 220,173
_0213
Psest_0214: Psest_0214 - exodeoxyribonuclease V, alpha subunit, at 220,244 to 222,091
_0214
Position (kb)
216
217
218
219
220
221 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 220.241 kb on + strand at 220.241 kb on + strand at 220.241 kb on + strand at 220.241 kb on + strand at 220.242 kb on - strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.243 kb on + strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand at 220.244 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Nalidixic 0.001 mg/ml remove 220,241 + -0.3 220,241 + -0.9 220,241 + +0.4 220,241 + +0.7 220,242 - -1.6 220,243 + +0.7 220,243 + -0.1 220,243 + -0.4 220,243 + -0.3 220,243 + +0.6 220,243 + -0.5 220,243 + -0.1 220,243 + -0.0 220,243 + +0.9 220,243 + +0.1 220,243 + +0.5 220,243 + -0.4 220,243 + -0.6 220,243 + -1.9 220,243 + -0.2 220,243 + +0.0 220,243 + -0.3 220,244 - +0.1 220,244 - -2.2 220,244 - -0.9 220,244 - -2.5 220,244 - -1.9 220,244 - +0.1 220,244 - -1.9 220,244 - -2.5 220,244 - -0.9 220,244 - +0.1 220,244 - -0.9 220,244 - +0.1 220,244 - -3.2 220,244 - -0.9 220,244 - -0.9 220,244 - -1.5 220,244 - -0.6
Or see this region's nucleotide sequence