Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1996

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
2,112,257	+		Psest_1995	0.19	+0.3
2,112,258	-		Psest_1995	0.19	+1.1
2,112,258	-		Psest_1995	0.19	-0.2
2,112,309	+		Psest_1995	0.24	-2.8
2,112,344	+		Psest_1995	0.28	+0.0
2,112,345	-		Psest_1995	0.28	+0.3
2,112,345	-		Psest_1995	0.28	+2.4
2,112,345	-		Psest_1995	0.28	+2.3
2,112,348	+		Psest_1995	0.28	+1.1
2,112,348	+		Psest_1995	0.28	-0.6
2,112,348	+		Psest_1995	0.28	-0.1
2,112,348	+		Psest_1995	0.28	+1.2
2,112,348	+		Psest_1995	0.28	-0.0
2,112,348	+		Psest_1995	0.28	+2.1
2,112,348	+		Psest_1995	0.28	+1.3
2,112,348	+		Psest_1995	0.28	-0.2
2,112,349	-		Psest_1995	0.28	-0.7
2,112,349	-		Psest_1995	0.28	+0.4
2,112,349	-		Psest_1995	0.28	+0.5
2,112,349	-		Psest_1995	0.28	+1.1
2,112,349	-		Psest_1995	0.28	-0.2
2,112,349	-		Psest_1995	0.28	+0.4
2,112,349	-		Psest_1995	0.28	+1.8
2,112,349	-		Psest_1995	0.28	+0.6
2,112,352	-		Psest_1995	0.29	-0.8
2,112,431	-		Psest_1995	0.37	-0.2
2,112,524	+		Psest_1995	0.47	-0.3
2,112,525	-		Psest_1995	0.48	+0.1
2,112,562	-		Psest_1995	0.52	-0.5
2,112,562	-		Psest_1995	0.52	+0.9
2,112,626	+		Psest_1995	0.58	+1.9
2,112,626	+		Psest_1995	0.58	+0.5
2,112,626	+		Psest_1995	0.58	+0.2
2,112,627	-		Psest_1995	0.59	-0.3
2,112,698	+		Psest_1995	0.66	+1.0
2,112,698	+		Psest_1995	0.66	+0.8
2,112,698	+		Psest_1995	0.66	+1.8
2,112,698	+		Psest_1995	0.66	+0.5
2,112,724	+		Psest_1995	0.69	-0.9
2,113,028	+				-1.7
2,113,029	-				-0.8
2,113,047	+				-0.3
2,113,048	-				-1.4
2,113,081	+				+0.4
2,113,081	+				+0.7
2,113,134	+				-0.1
2,113,134	+				-0.8
2,113,312	-				-0.3
2,113,485	+		Psest_1996	0.18	+0.8
2,113,485	+		Psest_1996	0.18	-0.6
2,113,518	+		Psest_1996	0.20	+0.1
2,113,518	+		Psest_1996	0.20	+1.1
2,113,519	-		Psest_1996	0.20	+0.1
2,113,519	-		Psest_1996	0.20	-0.2
2,113,522	+		Psest_1996	0.20	-0.5
2,113,566	+		Psest_1996	0.23	-0.7
2,113,566	+		Psest_1996	0.23	+0.2
2,113,588	+		Psest_1996	0.25	+0.1
2,113,588	+		Psest_1996	0.25	+0.0
2,113,588	+		Psest_1996	0.25	-0.9
2,113,588	+		Psest_1996	0.25	+1.2
2,113,588	+		Psest_1996	0.25	+0.1
2,113,588	+		Psest_1996	0.25	-0.2
2,113,588	+		Psest_1996	0.25	+0.7
2,113,588	+		Psest_1996	0.25	+0.1
2,113,588	+		Psest_1996	0.25	-0.4
2,113,588	+		Psest_1996	0.25	-0.5
2,113,588	+		Psest_1996	0.25	+2.1
2,113,588	+		Psest_1996	0.25	-0.9
2,113,588	+		Psest_1996	0.25	-0.2
2,113,588	+		Psest_1996	0.25	-1.2
2,113,588	+		Psest_1996	0.25	-1.2
2,113,588	+		Psest_1996	0.25	+1.2
2,113,588	+		Psest_1996	0.25	-1.3
2,113,589	-		Psest_1996	0.25	-1.0
2,113,589	-		Psest_1996	0.25	-0.5
2,113,589	-		Psest_1996	0.25	-0.2
2,113,589	-		Psest_1996	0.25	-0.5
2,113,589	-		Psest_1996	0.25	-0.4
2,113,589	-		Psest_1996	0.25	-1.4
2,113,589	-		Psest_1996	0.25	-0.5
2,113,589	-		Psest_1996	0.25	+0.6
2,113,589	-		Psest_1996	0.25	-0.1
2,113,589	-		Psest_1996	0.25	-1.8
2,113,589	-		Psest_1996	0.25	+0.5
2,113,589	-		Psest_1996	0.25	+0.2
2,113,589	-		Psest_1996	0.25	-0.1
2,113,589	-		Psest_1996	0.25	+0.6
2,113,591	-		Psest_1996	0.25	+1.1
2,113,591	-		Psest_1996	0.25	+0.3
2,113,734	+		Psest_1996	0.35	+0.1
2,113,750	-		Psest_1996	0.36	+0.6
2,113,750	-		Psest_1996	0.36	+0.4
2,113,750	-		Psest_1996	0.36	+0.5
2,113,753	+		Psest_1996	0.36	-0.9
2,113,753	+		Psest_1996	0.36	-0.4
2,113,753	+		Psest_1996	0.36	-0.2
2,113,753	+		Psest_1996	0.36	-0.4
2,113,753	+		Psest_1996	0.36	-1.5
2,113,753	+		Psest_1996	0.36	-0.2
2,113,753	+		Psest_1996	0.36	-0.2
2,113,753	+		Psest_1996	0.36	-0.3
2,113,753	+		Psest_1996	0.36	-0.0
2,113,754	-		Psest_1996	0.36	-0.6
2,113,754	-		Psest_1996	0.36	-0.1
2,113,754	-		Psest_1996	0.36	-1.2
2,113,754	-		Psest_1996	0.36	+0.8
2,113,890	+		Psest_1996	0.45	+0.3
2,113,992	-		Psest_1996	0.52	+0.3
2,114,018	-		Psest_1996	0.54	-0.2
2,114,079	+		Psest_1996	0.58	-1.4
2,114,189	+		Psest_1996	0.66	-0.1
2,114,189	+		Psest_1996	0.66	+0.1
2,114,217	+		Psest_1996	0.68	-1.2
2,114,218	-		Psest_1996	0.68	-0.6
2,114,218	-		Psest_1996	0.68	-0.0
2,114,218	-		Psest_1996	0.68	-0.3
2,114,218	-		Psest_1996	0.68	-0.0
2,114,289	+		Psest_1996	0.72	+0.1
2,114,289	+		Psest_1996	0.72	-0.2
2,114,290	-		Psest_1996	0.73	+0.8
2,114,360	+		Psest_1996	0.77	-0.9
2,114,360	+		Psest_1996	0.77	-0.6
2,114,361	-		Psest_1996	0.77	+0.8
2,114,361	-		Psest_1996	0.77	-0.2
2,114,361	-		Psest_1996	0.77	-0.3
2,114,406	-		Psest_1996	0.80	+0.3
2,114,451	+		Psest_1996	0.83	+0.2
2,114,451	+		Psest_1996	0.83	+0.5
2,114,452	-		Psest_1996	0.84	-0.5
2,114,478	+		Psest_1996	0.85	-1.0
2,114,491	+		Psest_1996	0.86	-0.5
2,114,491	+		Psest_1996	0.86	+0.7
2,114,491	+		Psest_1996	0.86	+0.0
2,114,492	-		Psest_1996	0.86	-1.1
2,114,532	-		Psest_1996	0.89	-0.3
2,114,975	+		Psest_1997	0.41	+0.3
2,115,241	+		Psest_1997	0.79	-1.1
2,115,252	-		Psest_1997	0.80	+0.4
2,115,361	+				+0.3
2,115,362	-				-0.3
2,115,362	-				+0.8
2,115,379	+				+0.9
2,115,485	-		Psest_1998	0.11	-0.7