Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1154

Experiment: Def Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.001 mg/ml
1,251,917	+		Psest_1153	0.72	-0.8
1,251,917	+		Psest_1153	0.72	+0.8
1,251,917	+		Psest_1153	0.72	-1.9
1,251,917	+		Psest_1153	0.72	-3.5
1,251,918	-		Psest_1153	0.72	-1.0
1,251,918	-		Psest_1153	0.72	-1.8
1,251,956	+		Psest_1153	0.74	-3.4
1,251,956	+		Psest_1153	0.74	-2.7
1,251,957	-		Psest_1153	0.74	-2.6
1,251,957	-		Psest_1153	0.74	-1.5
1,251,957	-		Psest_1153	0.74	-2.1
1,252,091	+		Psest_1153	0.78	-1.1
1,252,091	+		Psest_1153	0.78	-0.1
1,252,091	+		Psest_1153	0.78	-0.8
1,252,091	+		Psest_1153	0.78	+0.2
1,252,092	-		Psest_1153	0.78	+0.0
1,252,092	-		Psest_1153	0.78	-0.7
1,252,130	+		Psest_1153	0.79	-1.5
1,252,130	+		Psest_1153	0.79	-1.6
1,252,130	+		Psest_1153	0.79	-0.6
1,252,131	-		Psest_1153	0.79	-1.0
1,252,131	-		Psest_1153	0.79	-1.1
1,252,131	-		Psest_1153	0.79	-2.6
1,252,131	-		Psest_1153	0.79	-1.5
1,252,292	+		Psest_1153	0.85	-1.4
1,252,328	+		Psest_1153	0.86	-1.5
1,252,329	-		Psest_1153	0.86	-1.4
1,252,329	-		Psest_1153	0.86	-2.1
1,252,329	-		Psest_1153	0.86	+0.2
1,252,340	+		Psest_1153	0.86	-0.2
1,252,340	+		Psest_1153	0.86	-0.7
1,252,340	+		Psest_1153	0.86	-1.9
1,252,340	+		Psest_1153	0.86	-1.3
1,252,340	+		Psest_1153	0.86	-1.3
1,252,340	+		Psest_1153	0.86	-1.0
1,252,340	+		Psest_1153	0.86	-0.6
1,252,340	+		Psest_1153	0.86	-1.6
1,252,341	-		Psest_1153	0.86	-3.3
1,252,446	-		Psest_1153	0.90	-1.3
1,252,446	-		Psest_1153	0.90	+0.3
1,252,479	-				-2.7
1,252,523	+				-1.6
1,252,523	+				+0.0
1,252,524	-				-0.2
1,252,524	-				-2.4
1,252,524	-				-0.8
1,252,524	-				-2.1
1,252,574	+				-1.0
1,252,574	+				-2.0
1,252,574	+				-2.1
1,252,575	-				-1.6
1,252,575	-				-0.6
1,252,766	+				-1.9
1,252,766	+				-1.9
1,252,767	-				-1.6
1,252,814	+				-2.4
1,253,003	+		Psest_1154	0.17	-2.0
1,253,004	-		Psest_1154	0.17	-1.1
1,253,004	-		Psest_1154	0.17	-0.2
1,253,037	+		Psest_1154	0.20	-2.4
1,253,038	-		Psest_1154	0.20	-1.8
1,253,078	+		Psest_1154	0.23	-0.1
1,253,348	+		Psest_1154	0.47	-2.7
1,253,348	+		Psest_1154	0.47	-2.1
1,253,349	-		Psest_1154	0.47	-1.3
1,253,349	-		Psest_1154	0.47	-0.2
1,253,349	-		Psest_1154	0.47	-1.1
1,253,400	-		Psest_1154	0.52	+0.0
1,253,400	-		Psest_1154	0.52	-1.7
1,253,400	-		Psest_1154	0.52	-1.2
1,253,400	-		Psest_1154	0.52	-1.9
1,253,400	-		Psest_1154	0.52	-2.0
1,253,407	+		Psest_1154	0.52	-1.4
1,253,407	+		Psest_1154	0.52	-1.6
1,253,407	+		Psest_1154	0.52	-2.0
1,253,407	+		Psest_1154	0.52	-1.5
1,253,407	+		Psest_1154	0.52	-1.8
1,253,407	+		Psest_1154	0.52	-1.3
1,253,407	+		Psest_1154	0.52	-2.8
1,253,407	+		Psest_1154	0.52	-0.3
1,253,407	+		Psest_1154	0.52	-2.9
1,253,408	-		Psest_1154	0.52	-1.2
1,253,408	-		Psest_1154	0.52	-1.6
1,253,408	-		Psest_1154	0.52	-2.3
1,253,408	-		Psest_1154	0.52	-2.8
1,253,408	-		Psest_1154	0.52	-0.8
1,253,408	-		Psest_1154	0.52	-0.1
1,253,408	-		Psest_1154	0.52	-1.6
1,253,408	-		Psest_1154	0.52	-1.4
1,253,532	-		Psest_1154	0.63	-2.4
1,253,662	-		Psest_1154	0.75	-0.8
1,253,864	+				-2.7
1,253,864	+				-2.0
1,253,864	+				-1.3
1,253,865	-				-0.6
1,253,865	-				-1.7
1,254,077	+				-1.4
1,254,078	-				-1.3
1,254,098	+				-2.2
1,254,098	+				+1.8
1,254,098	+				+0.6
1,254,098	+				-0.8
1,254,098	+				-0.7
1,254,099	-				-3.6
1,254,099	-				-1.4
1,254,380	-		Psest_1155	0.13	+1.4
1,254,380	-		Psest_1155	0.13	+0.3
1,254,853	+		Psest_1155	0.42	+0.4