Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4235

Experiment: Def Nalidixic 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.0005 mg/ml
4,416,503	+		Psest_4234	0.40	-0.2
4,416,503	+		Psest_4234	0.40	+1.5
4,416,503	+		Psest_4234	0.40	+0.1
4,416,504	-		Psest_4234	0.40	-0.7
4,416,767	+		Psest_4234	0.62	-0.7
4,416,767	+		Psest_4234	0.62	-0.1
4,416,767	+		Psest_4234	0.62	-0.2
4,416,767	+		Psest_4234	0.62	+0.8
4,416,767	+		Psest_4234	0.62	-0.6
4,416,768	-		Psest_4234	0.62	-0.2
4,416,871	-		Psest_4234	0.71	+0.5
4,416,881	+		Psest_4234	0.72	+0.4
4,416,882	-		Psest_4234	0.72	-1.5
4,417,053	-		Psest_4234	0.86	+0.2
4,417,053	-		Psest_4234	0.86	+0.4
4,417,205	+				+0.2
4,417,205	+				+0.4
4,417,205	+				-1.2
4,417,205	+				-0.2
4,417,205	+				-0.8
4,417,205	+				-0.5
4,417,205	+				-0.4
4,417,205	+				+0.3
4,417,205	+				+1.7
4,417,206	-				-0.6
4,417,206	-				+0.4
4,417,206	-				-0.8
4,417,263	+				-0.2
4,417,263	+				+0.2
4,417,263	+				-0.5
4,417,263	+				-0.3
4,417,263	+				+0.4
4,417,263	+				+0.3
4,417,263	+				-0.7
4,417,263	+				+0.5
4,417,264	-				-0.1
4,417,264	-				-0.0
4,417,264	-				+0.6
4,417,264	-				+0.6
4,417,264	-				+0.2
4,417,407	+				+1.0
4,417,407	+				-0.2
4,417,408	-				+0.7
4,417,408	-				-0.7
4,417,408	-				+0.8
4,417,456	-				+0.2
4,417,456	-				-0.0
4,417,551	+		Psest_4235	0.14	-0.4
4,417,551	+		Psest_4235	0.14	-0.5
4,417,551	+		Psest_4235	0.14	+0.8
4,417,551	+		Psest_4235	0.14	+1.8
4,417,551	+		Psest_4235	0.14	-0.3
4,417,551	+		Psest_4235	0.14	+1.4
4,417,551	+		Psest_4235	0.14	+0.1
4,417,551	+		Psest_4235	0.14	-0.2
4,417,551	+		Psest_4235	0.14	+1.0
4,417,551	+		Psest_4235	0.14	+0.5
4,417,551	+		Psest_4235	0.14	-0.6
4,417,551	+		Psest_4235	0.14	-0.2
4,417,551	+		Psest_4235	0.14	-0.0
4,417,551	+		Psest_4235	0.14	+0.1
4,417,551	+		Psest_4235	0.14	-0.6
4,417,551	+		Psest_4235	0.14	+0.4
4,417,552	-		Psest_4235	0.14	+0.3
4,417,552	-		Psest_4235	0.14	-1.8
4,417,552	-		Psest_4235	0.14	+0.6
4,417,552	-		Psest_4235	0.14	+0.4
4,417,552	-		Psest_4235	0.14	-0.0
4,417,552	-		Psest_4235	0.14	-0.2
4,417,552	-		Psest_4235	0.14	-0.2
4,417,552	-		Psest_4235	0.14	+0.3
4,417,552	-		Psest_4235	0.14	+0.0
4,417,552	-		Psest_4235	0.14	+0.9
4,417,552	-		Psest_4235	0.14	+1.5
4,417,552	-		Psest_4235	0.14	+0.2
4,417,552	-		Psest_4235	0.14	+0.7
4,417,552	-		Psest_4235	0.14	-1.1
4,417,552	-		Psest_4235	0.14	+1.4
4,417,552	-		Psest_4235	0.14	+0.6
4,417,552	-		Psest_4235	0.14	-0.4
4,417,609	+		Psest_4235	0.16	-0.5
4,417,609	+		Psest_4235	0.16	+0.5
4,417,609	+		Psest_4235	0.16	-0.2
4,417,610	-		Psest_4235	0.17	-0.2
4,417,656	+		Psest_4235	0.19	-0.2
4,418,343	+		Psest_4235	0.51	+2.1
4,418,343	+		Psest_4235	0.51	-1.5
4,418,343	+		Psest_4235	0.51	+0.5
4,418,344	-		Psest_4235	0.51	-0.3
4,418,344	-		Psest_4235	0.51	+0.2
4,418,344	-		Psest_4235	0.51	-1.7
4,418,773	+		Psest_4235	0.72	-0.0
4,418,773	+		Psest_4235	0.72	+0.6
4,418,774	-		Psest_4235	0.72	+0.4
4,418,814	+		Psest_4235	0.74	-0.5
4,418,814	+		Psest_4235	0.74	+0.4
4,418,814	+		Psest_4235	0.74	+1.1
4,418,814	+		Psest_4235	0.74	+0.0
4,418,814	+		Psest_4235	0.74	-1.9
4,418,814	+		Psest_4235	0.74	-0.5
4,418,814	+		Psest_4235	0.74	-0.2
4,418,814	+		Psest_4235	0.74	-1.5
4,418,814	+		Psest_4235	0.74	+0.5
4,418,814	+		Psest_4235	0.74	-1.4
4,418,815	-		Psest_4235	0.74	+0.0
4,418,815	-		Psest_4235	0.74	-0.5
4,418,815	-		Psest_4235	0.74	+0.2
4,418,815	-		Psest_4235	0.74	+0.1
4,419,227	+				+0.8
4,419,227	+				+1.4
4,419,227	+				-0.2
4,419,228	-				+0.1
4,419,505	+				+0.6
4,419,506	-				-0.4
4,419,506	-				+0.8
4,419,559	-				+0.8
4,419,573	+				-0.8
4,419,662	+				-1.0
4,419,662	+				+2.4
4,419,662	+				-2.0
4,419,662	+				-0.8
4,419,662	+				+0.5
4,419,663	-				-0.5
4,419,667	+				+1.2
4,419,668	-				-1.3
4,419,668	-				+0.4
4,419,688	+				-0.5
4,419,688	+				+0.8
4,419,688	+				+0.6
4,419,688	+				-0.2
4,419,688	+				-0.5
4,419,770	+		Psest_4236	0.14	+0.0
4,419,770	+		Psest_4236	0.14	+0.5
4,419,770	+		Psest_4236	0.14	-0.3
4,419,771	-		Psest_4236	0.14	-0.5
4,419,771	-		Psest_4236	0.14	+0.5
4,419,771	-		Psest_4236	0.14	+0.5
4,419,771	-		Psest_4236	0.14	-0.1
4,419,777	+		Psest_4236	0.15	-0.2
4,419,777	+		Psest_4236	0.15	+0.2
4,419,777	+		Psest_4236	0.15	+0.8
4,419,777	+		Psest_4236	0.15	+0.5
4,419,777	+		Psest_4236	0.15	-1.2
4,419,778	-		Psest_4236	0.15	+0.2
4,419,778	-		Psest_4236	0.15	+0.1
4,419,778	-		Psest_4236	0.15	-1.2
4,419,780	+		Psest_4236	0.15	+0.1
4,419,780	+		Psest_4236	0.15	-0.0
4,419,780	+		Psest_4236	0.15	+0.5
4,419,781	-		Psest_4236	0.15	-0.1
4,419,791	+		Psest_4236	0.16	-1.6
4,419,791	+		Psest_4236	0.16	+1.8
4,419,792	-		Psest_4236	0.16	-0.3
4,419,792	-		Psest_4236	0.16	-0.0
4,419,792	-		Psest_4236	0.16	-0.3
4,420,313	+		Psest_4236	0.59	+0.6
4,420,314	-		Psest_4236	0.59	+0.8