Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2951

Experiment: Def Nalidixic 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.0005 mg/ml
3,146,762	-		Psest_2950	0.19	+1.4
3,146,904	-		Psest_2950	0.34	-0.3
3,146,914	+		Psest_2950	0.35	+0.5
3,146,915	-		Psest_2950	0.35	+1.0
3,147,187	+		Psest_2950	0.63	+0.4
3,147,339	+		Psest_2950	0.79	+0.2
3,147,340	-		Psest_2950	0.79	+0.7
3,147,383	+		Psest_2950	0.83	+1.4
3,147,525	-				-1.0
3,147,553	+				-2.2
3,147,562	+				+1.0
3,147,562	+				-0.7
3,147,563	-				-1.8
3,147,563	-				-0.3
3,147,611	+				+0.4
3,147,611	+				+0.8
3,147,612	-				+2.6
3,147,662	+				+0.5
3,147,662	+				+0.7
3,147,667	+				-1.3
3,147,667	+				+0.6
3,147,667	+				+0.1
3,147,676	+				+1.7
3,149,898	+				-0.3
3,149,898	+				-0.2
3,149,898	+				-0.5
3,149,898	+				+0.4
3,149,899	-				+0.2
3,149,900	+				-0.1
3,149,931	+				-0.1
3,149,931	+				-1.3
3,149,931	+				-1.6
3,149,932	-				+0.2
3,149,932	-				+0.8
3,149,932	-				+0.7
3,149,932	-				+1.7
3,149,988	+				+1.2
3,149,988	+				+0.3
3,149,988	+				+0.4
3,149,988	+				-0.5
3,149,989	-				+0.8
3,149,989	-				-0.5
3,149,989	-				-0.2
3,149,989	-				+0.5
3,150,042	-		Psest_2952	0.34	+1.6
3,150,066	-		Psest_2952	0.49	+0.1
3,150,133	-				+0.2
3,150,274	+				-0.2
3,150,274	+				-0.4
3,150,275	-				-1.6
3,150,276	+				-1.7
3,150,276	+				+0.4
3,150,276	+				+0.7
3,150,276	+				+0.6
3,150,276	+				+0.5
3,150,276	+				-1.0
3,150,276	+				+0.4
3,150,276	+				-0.2
3,150,276	+				-1.0
3,150,276	+				-0.0
3,150,276	+				-0.4
3,150,277	-				+1.0
3,150,277	-				-1.2
3,150,277	-				-0.8
3,150,277	-				-0.7
3,150,277	-				-0.1
3,150,277	-				-0.9
3,150,277	-				+0.6
3,150,277	-				+0.4
3,150,277	-				-0.6
3,150,416	-				-0.2
3,150,467	-		Psest_2953	0.18	-1.5
3,150,690	-		Psest_2953	0.65	-1.2
3,150,698	-		Psest_2953	0.67	-1.4