Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2143

Experiment: Def Nalidixic 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.0005 mg/ml
2,284,784	+		Psest_2142	0.30	-1.0
2,284,785	-		Psest_2142	0.30	+0.5
2,284,785	-		Psest_2142	0.30	+1.0
2,284,785	-		Psest_2142	0.30	+0.8
2,284,785	-		Psest_2142	0.30	+0.2
2,284,785	-		Psest_2142	0.30	-0.7
2,284,786	+		Psest_2142	0.30	+1.0
2,284,786	+		Psest_2142	0.30	+0.3
2,284,786	+		Psest_2142	0.30	-1.2
2,284,786	+		Psest_2142	0.30	+0.4
2,284,786	+		Psest_2142	0.30	+1.0
2,284,786	+		Psest_2142	0.30	-1.7
2,284,786	+		Psest_2142	0.30	-0.1
2,284,786	+		Psest_2142	0.30	-0.5
2,284,787	-		Psest_2142	0.30	-0.0
2,284,787	-		Psest_2142	0.30	-0.6
2,284,787	-		Psest_2142	0.30	+0.3
2,284,787	-		Psest_2142	0.30	-1.0
2,284,787	-		Psest_2142	0.30	-0.9
2,284,787	-		Psest_2142	0.30	-0.3
2,284,817	+		Psest_2142	0.33	-0.3
2,284,818	-		Psest_2142	0.33	+1.0
2,284,818	-		Psest_2142	0.33	+2.0
2,284,819	+		Psest_2142	0.33	-0.0
2,284,819	+		Psest_2142	0.33	-1.0
2,284,819	+		Psest_2142	0.33	+1.0
2,284,820	-		Psest_2142	0.33	-0.0
2,284,820	-		Psest_2142	0.33	+0.2
2,284,820	-		Psest_2142	0.33	-1.3
2,284,820	-		Psest_2142	0.33	+1.6
2,284,849	+		Psest_2142	0.36	-0.0
2,284,849	+		Psest_2142	0.36	+0.4
2,284,849	+		Psest_2142	0.36	-0.6
2,284,849	+		Psest_2142	0.36	+3.0
2,284,849	+		Psest_2142	0.36	+0.4
2,284,849	+		Psest_2142	0.36	+0.4
2,284,850	-		Psest_2142	0.36	-0.5
2,284,850	-		Psest_2142	0.36	+0.0
2,284,850	-		Psest_2142	0.36	-0.9
2,284,850	-		Psest_2142	0.36	-0.6
2,284,850	-		Psest_2142	0.36	-0.2
2,284,850	-		Psest_2142	0.36	-0.0
2,284,850	-		Psest_2142	0.36	+0.8
2,284,881	+		Psest_2142	0.39	+2.0
2,284,881	+		Psest_2142	0.39	+0.1
2,284,881	+		Psest_2142	0.39	-1.5
2,284,934	+		Psest_2142	0.45	+1.0
2,284,934	+		Psest_2142	0.45	+0.5
2,284,935	-		Psest_2142	0.45	-0.3
2,285,066	-		Psest_2142	0.58	-0.6
2,285,078	+		Psest_2142	0.59	-0.0
2,285,200	+		Psest_2142	0.71	+0.3
2,285,200	+		Psest_2142	0.71	+1.0
2,285,200	+		Psest_2142	0.71	-0.3
2,285,200	+		Psest_2142	0.71	+0.3
2,285,201	-		Psest_2142	0.72	-0.1
2,285,201	-		Psest_2142	0.72	+0.3
2,285,391	+				+1.0
2,285,391	+				-0.3
2,285,469	-				-1.3
2,285,495	+				-0.6
2,285,495	+				+2.0
2,285,496	-				+1.0
2,285,496	-				-0.1
2,285,547	+				+0.3
2,285,548	-				-0.1
2,285,548	-				-0.0
2,285,567	-				-1.3
2,285,577	+				+1.3
2,285,577	+				+0.4
2,285,577	+				-0.6
2,285,577	+				-0.3
2,285,577	+				+0.3
2,285,577	+				-0.0
2,285,578	-				+0.8
2,285,578	-				-0.1
2,285,578	-				+1.5
2,285,728	+				-0.6
2,285,729	-				-0.8
2,285,850	+		Psest_2143	0.15	+1.0
2,285,850	+		Psest_2143	0.15	+0.4
2,285,850	+		Psest_2143	0.15	+1.3
2,285,850	+		Psest_2143	0.15	+0.8
2,285,850	+		Psest_2143	0.15	+1.7
2,285,851	-		Psest_2143	0.15	-0.0
2,285,851	-		Psest_2143	0.15	+0.4
2,285,851	-		Psest_2143	0.15	+0.3
2,285,851	-		Psest_2143	0.15	+0.3
2,285,851	-		Psest_2143	0.15	+0.3
2,285,983	+		Psest_2143	0.24	+0.8
2,285,983	+		Psest_2143	0.24	-1.0
2,285,983	+		Psest_2143	0.24	+1.0
2,285,984	-		Psest_2143	0.24	+1.0
2,285,984	-		Psest_2143	0.24	-0.4
2,285,984	-		Psest_2143	0.24	+0.5
2,286,046	-		Psest_2143	0.29	+1.0
2,286,046	-		Psest_2143	0.29	-0.0
2,286,853	+		Psest_2143	0.84	+2.3
2,286,854	-		Psest_2143	0.84	+0.5
2,286,962	-				-0.0
2,287,096	-				+2.6
2,287,096	-				-0.2
2,287,096	-				-0.0
2,287,146	+				+0.5
2,287,545	+		Psest_2144	0.15	-0.6
2,287,545	+		Psest_2144	0.15	+0.9
2,287,546	-		Psest_2144	0.15	+0.4
2,287,630	-		Psest_2144	0.17	+1.0
2,287,719	+		Psest_2144	0.20	+0.4
2,287,767	+		Psest_2144	0.22	+0.3
2,287,767	+		Psest_2144	0.22	+0.0
2,287,768	-		Psest_2144	0.22	+1.2
2,287,918	-		Psest_2144	0.27	-0.3
2,287,918	-		Psest_2144	0.27	+1.4
2,287,918	-		Psest_2144	0.27	+2.3
2,287,950	+		Psest_2144	0.28	-0.4
2,287,965	+		Psest_2144	0.28	-2.0
2,288,064	+		Psest_2144	0.31	+1.2