Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1218

Experiment: Def Nalidixic 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Nalidixic 0.0005 mg/ml
1,325,332	-		Psest_1217	0.44	-0.9
1,325,358	+		Psest_1217	0.46	-0.1
1,325,514	+		Psest_1217	0.57	-1.1
1,325,514	+		Psest_1217	0.57	+0.2
1,325,514	+		Psest_1217	0.57	-0.3
1,325,515	-		Psest_1217	0.57	+0.4
1,325,775	+		Psest_1217	0.75	-0.5
1,325,776	-		Psest_1217	0.75	+1.6
1,325,776	-		Psest_1217	0.75	-0.0
1,325,785	+		Psest_1217	0.75	+0.0
1,325,985	+		Psest_1217	0.89	+0.8
1,325,985	+		Psest_1217	0.89	-0.0
1,325,986	-		Psest_1217	0.89	+0.5
1,325,986	-		Psest_1217	0.89	+1.0
1,325,986	-		Psest_1217	0.89	+0.1
1,325,986	-		Psest_1217	0.89	+0.7
1,325,989	+		Psest_1217	0.89	-0.4
1,325,989	+		Psest_1217	0.89	-0.1
1,325,990	-		Psest_1217	0.89	+0.7
1,325,990	-		Psest_1217	0.89	-0.1
1,326,035	+				+0.2
1,326,035	+				+1.0
1,326,036	-				-1.3
1,326,037	+				+1.1
1,326,038	-				-0.4
1,326,155	-				-1.9
1,326,156	+				-0.8
1,326,156	+				-0.2
1,326,156	+				+1.0
1,326,157	-				+0.3
1,326,207	-				-1.7
1,326,207	-				-0.7
1,326,228	+				-0.2
1,326,228	+				+0.2
1,326,228	+				-1.3
1,326,229	-				-0.9
1,326,274	-				-0.3
1,326,349	+		Psest_1218	0.12	+0.3
1,326,349	+		Psest_1218	0.12	-0.7
1,326,350	-		Psest_1218	0.12	-0.3
1,326,380	-		Psest_1218	0.23	-1.0
1,326,479	-		Psest_1218	0.59	-0.3
1,326,479	-		Psest_1218	0.59	-0.5
1,326,479	-		Psest_1218	0.59	-0.8
1,326,636	-				-0.3
1,326,659	+				-0.5
1,326,659	+				-0.3
1,326,660	-				+1.5
1,326,862	+		Psest_1219	0.19	-0.7
1,326,866	+		Psest_1219	0.20	-1.0
1,326,866	+		Psest_1219	0.20	-1.8
1,326,866	+		Psest_1219	0.20	+0.2
1,326,866	+		Psest_1219	0.20	-0.1
1,326,867	-		Psest_1219	0.20	-0.6
1,326,867	-		Psest_1219	0.20	+0.4
1,326,867	-		Psest_1219	0.20	+1.3
1,327,157	-		Psest_1219	0.51	+0.8
1,327,157	-		Psest_1219	0.51	-0.1
1,327,157	-		Psest_1219	0.51	-0.6
1,327,515	+		Psest_1219	0.89	+0.2
1,327,516	-		Psest_1219	0.89	+1.4