Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4054

Experiment: Def Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Doxycycline hyclate 0.0006 mg/ml
4,225,904	-				-0.2
4,225,941	+				+0.1
4,225,942	-				-0.7
4,225,942	-				+0.5
4,226,005	+				-0.6
4,226,006	-				-0.1
4,226,342	-		Psest_4053	0.46	+0.7
4,226,342	-		Psest_4053	0.46	+1.3
4,226,342	-		Psest_4053	0.46	-0.5
4,226,353	+		Psest_4053	0.48	+0.2
4,226,353	+		Psest_4053	0.48	+0.7
4,226,353	+		Psest_4053	0.48	-1.5
4,226,353	+		Psest_4053	0.48	+0.4
4,226,353	+		Psest_4053	0.48	+0.6
4,226,354	-		Psest_4053	0.48	-0.6
4,226,354	-		Psest_4053	0.48	-0.2
4,226,354	-		Psest_4053	0.48	+0.0
4,226,354	-		Psest_4053	0.48	-1.0
4,226,354	-		Psest_4053	0.48	+0.5
4,226,354	-		Psest_4053	0.48	-0.1
4,226,781	-				+0.7
4,226,800	+				-0.3
4,226,801	-				+1.1
4,226,878	-				-0.9
4,226,945	-				+0.2
4,227,073	+		Psest_4054	0.17	-1.3
4,227,074	-		Psest_4054	0.17	-0.1
4,227,448	+		Psest_4054	0.49	+1.7
4,227,448	+		Psest_4054	0.49	-0.6
4,227,448	+		Psest_4054	0.49	-1.1
4,227,449	-		Psest_4054	0.50	+0.7
4,227,449	-		Psest_4054	0.50	-0.2
4,227,505	+		Psest_4054	0.54	-0.9
4,227,581	-		Psest_4054	0.61	-1.2
4,227,581	-		Psest_4054	0.61	+1.0
4,227,937	+				-0.5
4,227,938	-				+0.4
4,227,938	-				-2.2
4,227,938	-				+1.0
4,227,979	+				+1.7
4,227,979	+				-0.3
4,227,979	+				-0.9
4,227,979	+				-0.6
4,227,979	+				+0.1
4,227,980	-				-0.8
4,227,980	-				+0.3
4,227,980	-				+0.7
4,228,016	+				-0.3
4,228,017	-				+0.7
4,228,400	+		Psest_4055	0.34	+0.3
4,228,401	-		Psest_4055	0.34	-0.8
4,228,401	-		Psest_4055	0.34	-0.6
4,228,401	-		Psest_4055	0.34	-2.6
4,228,401	-		Psest_4055	0.34	+0.5
4,228,453	+		Psest_4055	0.39	-1.3
4,228,454	-		Psest_4055	0.39	+0.5
4,228,454	-		Psest_4055	0.39	-0.3
4,228,550	+		Psest_4055	0.49	+0.7
4,228,550	+		Psest_4055	0.49	+0.7
4,228,550	+		Psest_4055	0.49	-0.6
4,228,550	+		Psest_4055	0.49	-0.9
4,228,551	-		Psest_4055	0.49	-1.2
4,228,551	-		Psest_4055	0.49	+0.6
4,228,571	+		Psest_4055	0.51	-1.4
4,228,571	+		Psest_4055	0.51	-0.6
4,228,571	+		Psest_4055	0.51	-0.3
4,228,571	+		Psest_4055	0.51	+1.7
4,228,572	-		Psest_4055	0.51	-1.7
4,228,610	+		Psest_4055	0.55	-0.2
4,228,610	+		Psest_4055	0.55	-1.5
4,228,610	+		Psest_4055	0.55	+0.1
4,228,736	+		Psest_4055	0.68	-0.1
4,228,736	+		Psest_4055	0.68	+1.7
4,228,736	+		Psest_4055	0.68	-0.3
4,228,737	-		Psest_4055	0.69	+0.1
4,228,737	-		Psest_4055	0.69	-0.2
4,228,737	-		Psest_4055	0.69	+1.7
4,228,737	-		Psest_4055	0.69	+0.5
4,228,737	-		Psest_4055	0.69	+0.0
4,228,931	+		Psest_4055	0.89	+1.7