Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3772

Experiment: Def Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Doxycycline hyclate 0.0006 mg/ml
3,938,021	+		Psest_3771	0.52	+0.7
3,938,022	-		Psest_3771	0.52	-0.1
3,938,022	-		Psest_3771	0.52	+0.1
3,938,022	-		Psest_3771	0.52	+0.2
3,938,022	-		Psest_3771	0.52	-0.9
3,938,169	-		Psest_3771	0.64	+0.7
3,938,303	+		Psest_3771	0.75	+0.1
3,938,304	-		Psest_3771	0.75	+2.3
3,938,304	-		Psest_3771	0.75	-0.7
3,938,306	+		Psest_3771	0.75	+0.1
3,938,306	+		Psest_3771	0.75	-2.2
3,938,306	+		Psest_3771	0.75	-0.3
3,938,306	+		Psest_3771	0.75	-0.0
3,938,307	-		Psest_3771	0.75	+1.7
3,938,307	-		Psest_3771	0.75	+1.7
3,938,307	-		Psest_3771	0.75	-1.1
3,938,307	-		Psest_3771	0.75	-0.4
3,938,307	-		Psest_3771	0.75	-0.5
3,938,307	-		Psest_3771	0.75	-2.1
3,938,307	-		Psest_3771	0.75	+0.7
3,938,405	+		Psest_3771	0.83	-1.0
3,938,405	+		Psest_3771	0.83	+0.5
3,938,405	+		Psest_3771	0.83	+1.3
3,938,405	+		Psest_3771	0.83	+1.1
3,938,405	+		Psest_3771	0.83	-0.7
3,938,405	+		Psest_3771	0.83	-0.2
3,938,405	+		Psest_3771	0.83	+0.9
3,938,405	+		Psest_3771	0.83	+0.6
3,938,406	-		Psest_3771	0.83	+0.2
3,938,406	-		Psest_3771	0.83	-0.2
3,938,414	+		Psest_3771	0.84	+0.1
3,938,414	+		Psest_3771	0.84	+0.2
3,938,414	+		Psest_3771	0.84	+0.3
3,938,414	+		Psest_3771	0.84	-0.0
3,938,414	+		Psest_3771	0.84	+0.4
3,938,414	+		Psest_3771	0.84	+0.7
3,938,414	+		Psest_3771	0.84	+1.3
3,938,414	+		Psest_3771	0.84	-1.1
3,938,414	+		Psest_3771	0.84	+0.2
3,938,414	+		Psest_3771	0.84	+0.2
3,938,414	+		Psest_3771	0.84	-1.2
3,938,414	+		Psest_3771	0.84	-0.3
3,938,414	+		Psest_3771	0.84	-1.5
3,938,414	+		Psest_3771	0.84	+0.7
3,938,414	+		Psest_3771	0.84	+0.2
3,938,414	+		Psest_3771	0.84	-0.3
3,938,414	+		Psest_3771	0.84	+1.3
3,938,414	+		Psest_3771	0.84	-0.1
3,938,414	+		Psest_3771	0.84	+0.9
3,938,414	+		Psest_3771	0.84	+1.4
3,938,415	-		Psest_3771	0.84	+0.4
3,938,415	-		Psest_3771	0.84	+0.1
3,938,415	-		Psest_3771	0.84	-1.2
3,938,415	-		Psest_3771	0.84	+0.2
3,938,415	-		Psest_3771	0.84	-1.0
3,938,415	-		Psest_3771	0.84	+0.0
3,938,415	-		Psest_3771	0.84	+0.4
3,938,415	-		Psest_3771	0.84	+0.4
3,938,415	-		Psest_3771	0.84	+0.3
3,938,415	-		Psest_3771	0.84	+1.7
3,938,415	-		Psest_3771	0.84	-2.1
3,938,415	-		Psest_3771	0.84	+0.7
3,938,415	-		Psest_3771	0.84	+0.7
3,938,415	-		Psest_3771	0.84	-0.7
3,938,415	-		Psest_3771	0.84	+1.2
3,938,415	-		Psest_3771	0.84	+0.4
3,938,415	-		Psest_3771	0.84	+0.7
3,938,415	-		Psest_3771	0.84	+0.8
3,938,415	-		Psest_3771	0.84	+0.9
3,938,415	-		Psest_3771	0.84	+1.2
3,938,415	-		Psest_3771	0.84	+0.9
3,938,415	-		Psest_3771	0.84	-0.5
3,938,415	-		Psest_3771	0.84	-0.4
3,938,415	-		Psest_3771	0.84	-0.8
3,938,415	-		Psest_3771	0.84	+0.7
3,938,415	-		Psest_3771	0.84	+0.4
3,938,415	-		Psest_3771	0.84	-0.3
3,938,415	-		Psest_3771	0.84	-0.9
3,938,415	-		Psest_3771	0.84	+0.3
3,938,415	-		Psest_3771	0.84	-0.4
3,938,415	-		Psest_3771	0.84	+1.7
3,938,415	-		Psest_3771	0.84	-0.0
3,938,417	+		Psest_3771	0.84	+0.8
3,938,432	+		Psest_3771	0.85	-0.1
3,938,432	+		Psest_3771	0.85	+2.0
3,938,432	+		Psest_3771	0.85	-1.1
3,938,432	+		Psest_3771	0.85	+2.5
3,938,432	+		Psest_3771	0.85	+1.7
3,938,432	+		Psest_3771	0.85	-0.7
3,938,432	+		Psest_3771	0.85	+0.8
3,938,432	+		Psest_3771	0.85	+0.7
3,938,432	+		Psest_3771	0.85	-1.4
3,938,432	+		Psest_3771	0.85	-0.9
3,938,432	+		Psest_3771	0.85	-0.1
3,938,433	-		Psest_3771	0.85	-0.6
3,938,433	-		Psest_3771	0.85	+0.0
3,938,433	-		Psest_3771	0.85	-0.0
3,938,433	-		Psest_3771	0.85	+0.3
3,938,433	-		Psest_3771	0.85	+0.8
3,938,433	-		Psest_3771	0.85	+0.8
3,938,433	-		Psest_3771	0.85	+0.0
3,938,433	-		Psest_3771	0.85	+2.0
3,938,433	-		Psest_3771	0.85	-1.1
3,938,433	-		Psest_3771	0.85	+1.7
3,938,433	-		Psest_3771	0.85	+0.1
3,938,433	-		Psest_3771	0.85	-1.0
3,938,433	-		Psest_3771	0.85	-0.7
3,938,453	+		Psest_3771	0.87	-0.9
3,938,453	+		Psest_3771	0.87	-0.4
3,938,570	+				-0.9
3,938,570	+				-0.8
3,938,570	+				-0.8
3,938,570	+				+0.1
3,938,570	+				+0.3
3,938,570	+				+0.1
3,938,570	+				+1.0
3,938,570	+				+0.1
3,938,570	+				-0.3
3,938,571	-				-0.0
3,938,571	-				-0.3
3,938,571	-				-1.9
3,938,571	-				+1.3
3,938,571	-				+0.2
3,938,614	-				-0.8
3,938,844	+				+0.3
3,938,844	+				+0.7
3,938,844	+				+1.0
3,938,844	+				+0.5
3,938,844	+				-0.7
3,938,844	+				+0.1
3,938,844	+				+0.2
3,938,844	+				-1.1
3,938,845	-				-1.1
3,938,862	+				+1.3
3,938,863	-				+0.2
3,938,863	-				-0.1
3,938,863	-				+0.5
3,939,275	-		Psest_3772	0.41	-0.5
3,939,537	+		Psest_3772	0.61	+0.1
3,939,537	+		Psest_3772	0.61	-1.7
3,939,537	+		Psest_3772	0.61	-1.5
3,939,537	+		Psest_3772	0.61	+0.7
3,939,538	-		Psest_3772	0.61	-1.7
3,939,538	-		Psest_3772	0.61	-0.6
3,939,538	-		Psest_3772	0.61	-0.7
3,939,799	-		Psest_3772	0.81	-0.3
3,939,799	-		Psest_3772	0.81	+0.8
3,940,004	+				+1.4
3,940,005	-				-0.5
3,940,005	-				-0.5
3,940,026	-				-0.8
3,940,057	+				+0.3
3,940,058	-				-0.1
3,940,091	+				+1.7
3,940,091	+				-0.3
3,940,092	-				+0.7
3,940,092	-				-1.2
3,940,092	-				-0.6
3,940,092	-				+1.1
3,940,092	-				+0.7
3,940,092	-				-2.2
3,940,791	+				-0.3
3,940,791	+				-0.9
3,940,791	+				-0.4
3,940,791	+				+0.1
3,940,791	+				+1.7
3,940,791	+				-0.9
3,940,791	+				+0.7
3,940,847	+				+1.3
3,940,847	+				-0.4
3,940,847	+				-0.5
3,940,847	+				+0.1
3,940,847	+				-0.6
3,940,847	+				+0.7
3,940,847	+				+1.7
3,940,848	-				-0.7
3,940,937	+		Psest_3774	0.43	+0.7