Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1374

Experiment: Def Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Doxycycline hyclate 0.0002 mg/ml
1,482,075	+		Psest_1373	0.16	-0.9
1,482,075	+		Psest_1373	0.16	+0.4
1,482,076	-		Psest_1373	0.16	-0.5
1,482,103	+		Psest_1373	0.18	-0.3
1,482,103	+		Psest_1373	0.18	-0.4
1,482,104	-		Psest_1373	0.19	+0.9
1,482,104	-		Psest_1373	0.19	+0.1
1,482,133	+		Psest_1373	0.22	+0.0
1,482,133	+		Psest_1373	0.22	+0.6
1,482,134	-		Psest_1373	0.22	-0.5
1,482,159	+		Psest_1373	0.24	+1.9
1,482,259	-		Psest_1373	0.35	+0.9
1,482,259	-		Psest_1373	0.35	-0.1
1,482,259	-		Psest_1373	0.35	+1.1
1,482,391	+		Psest_1373	0.49	-0.6
1,482,391	+		Psest_1373	0.49	-0.6
1,482,460	+		Psest_1373	0.56	+0.2
1,482,461	-		Psest_1373	0.56	-0.2
1,482,461	-		Psest_1373	0.56	+0.8
1,482,601	+		Psest_1373	0.71	-1.9
1,482,601	+		Psest_1373	0.71	-0.3
1,482,602	-		Psest_1373	0.71	-0.8
1,482,899	+				-1.3
1,482,899	+				+0.5
1,482,906	-				+1.2
1,482,906	-				+0.0
1,482,960	+				+0.3
1,482,960	+				+0.4
1,482,960	+				-0.0
1,482,960	+				+0.3
1,482,960	+				-0.0
1,482,961	-				-0.4
1,482,961	-				+0.1
1,482,961	-				-0.0
1,482,961	-				-0.9
1,482,961	-				-0.3
1,482,961	-				+0.9
1,482,961	-				-0.2
1,482,961	-				-0.9
1,483,045	+				-0.4
1,483,115	+				-0.6
1,483,115	+				+0.3
1,483,345	+		Psest_1374	0.28	-1.2
1,483,346	-		Psest_1374	0.28	-0.1
1,483,346	-		Psest_1374	0.28	-0.5
1,483,351	+		Psest_1374	0.28	-1.1
1,483,352	-		Psest_1374	0.28	-2.3
1,483,523	+		Psest_1374	0.42	-0.7
1,483,524	-		Psest_1374	0.42	+0.2
1,483,524	-		Psest_1374	0.42	-0.6
1,483,524	-		Psest_1374	0.42	+0.3
1,483,524	-		Psest_1374	0.42	+0.8
1,483,677	+		Psest_1374	0.55	-0.0
1,483,862	+		Psest_1374	0.70	+0.2
1,483,862	+		Psest_1374	0.70	-1.1
1,483,862	+		Psest_1374	0.70	-1.8
1,483,863	-		Psest_1374	0.70	+0.6
1,483,863	-		Psest_1374	0.70	-0.0
1,483,863	-		Psest_1374	0.70	-0.7
1,484,045	+		Psest_1374	0.85	-0.9
1,484,045	+		Psest_1374	0.85	-0.6
1,484,046	-		Psest_1374	0.85	+1.1
1,484,046	-		Psest_1374	0.85	-0.0
1,484,046	-		Psest_1374	0.85	-0.0
1,484,046	-		Psest_1374	0.85	-0.5
1,484,236	+				+1.4
1,484,265	-				+0.4
1,484,265	-				+0.9
1,484,420	-				-0.6
1,484,439	+				+1.4
1,484,439	+				+2.1
1,484,440	-				-0.6
1,484,633	+				+0.8
1,484,633	+				-0.1
1,485,008	+		Psest_1375	0.21	-0.7
1,485,008	+		Psest_1375	0.21	-1.0
1,485,104	+		Psest_1375	0.26	-0.2
1,485,104	+		Psest_1375	0.26	-0.8
1,485,104	+		Psest_1375	0.26	+0.1
1,485,104	+		Psest_1375	0.26	-0.1
1,485,105	-		Psest_1375	0.26	+1.1
1,485,105	-		Psest_1375	0.26	+0.1
1,485,105	-		Psest_1375	0.26	+0.1
1,485,105	-		Psest_1375	0.26	+0.7
1,485,105	-		Psest_1375	0.26	+0.2
1,485,105	-		Psest_1375	0.26	-0.2
1,485,105	-		Psest_1375	0.26	-1.9
1,485,105	-		Psest_1375	0.26	-0.3
1,485,107	+		Psest_1375	0.26	-2.1
1,485,107	+		Psest_1375	0.26	-0.9
1,485,108	-		Psest_1375	0.26	+0.6
1,485,108	-		Psest_1375	0.26	+0.2
1,485,108	-		Psest_1375	0.26	+0.6
1,485,108	-		Psest_1375	0.26	+0.2